NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NDP is a Ligand Of Interest in 1Y5R designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1Y5R_NDP_A_1 | 97% | 24% | 0.057 | 0.981 | 1.68 | 1.34 | 11 | 9 | 2 | 0 | 100% | 1 |
| 1Y5R_NDP_B_2 | 91% | 24% | 0.073 | 0.968 | 1.6 | 1.43 | 11 | 9 | 5 | 0 | 100% | 1 |
| 3GMD_NDP_D_300 | 100% | 22% | 0.02 | 0.997 | 1.48 | 1.67 | 8 | 14 | 3 | 0 | 100% | 1 |
| 4NMH_NDP_C_302 | 100% | 25% | 0.023 | 0.997 | 1.48 | 1.47 | 6 | 7 | 1 | 0 | 100% | 1 |
| 4K26_NDP_A_304 | 56% | 57% | 0.109 | 0.879 | 0.42 | 1.07 | - | 4 | 6 | 0 | 100% | 1 |
| 1Y5M_NDP_B_2 | 32% | 22% | 0.17 | 0.844 | 1.66 | 1.5 | 11 | 10 | 6 | 0 | 100% | 1 |
| 1A80_NDP_A_300 | 100% | 15% | 0.01 | 0.999 | 1.91 | 1.79 | 8 | 8 | 10 | 0 | 100% | 1 |
| 2PF8_NDP_A_318 | 100% | 49% | 0.011 | 0.999 | 1.13 | 0.77 | 3 | - | 4 | 0 | 100% | 1 |
| 1H6D_NDP_L_500 | 100% | 18% | 0.016 | 0.998 | 1.69 | 1.72 | 12 | 13 | 10 | 0 | 100% | 1 |
| 2DBV_NDP_O_336 | 100% | 14% | 0.015 | 0.997 | 1.56 | 2.18 | 8 | 21 | 2 | 0 | 100% | 1 |
| 2I16_NDP_A_319 | 100% | 47% | 0.018 | 0.999 | 1.21 | 0.74 | 3 | - | 0 | 0 | 100% | 1 |
