Ligand validation:1VC8


5FA: ADENOSINE-5'-PENTAPHOSPHATE

5FA is a Ligand Of Interest in 1VC8 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1VC8_5FA_B_502Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter1VC8_5FA_B_502Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
1VC8_5FA_B_502 82% 5% 0.099 0.9553.11 2.4 12 1100100%1
1VC8_5FA_A_501 78% 4% 0.113 0.9573.31 2.44 10 1300100%1
5XD2_5FA_A_401 87% 32% 0.087 0.961.17 1.51 3 510100%1
5XD1_5FA_A_401 87% 31% 0.085 0.9551.09 1.62 2 720100%1
7AUQ_5FA_A_201 57% 36% 0.15 0.9251.28 1.25 3 310100%1
6PVV_5FA_A_201 19% 10% 0.208 0.8031.59 2.74 3 1100100%1