AMP: ADENOSINE MONOPHOSPHATE
AMP is a Ligand Of Interest in 2C38 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2C38_AMP_N_403 | 81% | 73% | 0.075 | 0.938 | 0.33 | 0.59 | - | - | 1 | 0 | 96% | 1 |
| 2C38_AMP_J_403 | 80% | 77% | 0.071 | 0.932 | 0.36 | 0.46 | - | - | 4 | 0 | 96% | 1 |
| 2C38_AMP_H_402 | 80% | 68% | 0.08 | 0.941 | 0.49 | 0.57 | - | - | 0 | 0 | 96% | 1 |
| 2C38_AMP_V_401 | 80% | 63% | 0.076 | 0.927 | 0.6 | 0.66 | - | - | 0 | 0 | 100% | 1 |
| 2C38_AMP_V_404 | 76% | 63% | 0.085 | 0.931 | 0.42 | 0.83 | - | 1 | 5 | 0 | 96% | 1 |
| 2C38_AMP_H_404 | 76% | 62% | 0.084 | 0.929 | 0.44 | 0.84 | - | 2 | 4 | 0 | 96% | 1 |
| 2C38_AMP_X_401 | 75% | 61% | 0.074 | 0.908 | 0.56 | 0.77 | - | 2 | 0 | 0 | 100% | 1 |
| 2C38_AMP_H_403 | 75% | 72% | 0.074 | 0.915 | 0.34 | 0.59 | - | - | 1 | 0 | 96% | 1 |
| 2C38_AMP_J_401 | 74% | 49% | 0.084 | 0.917 | 0.59 | 1.24 | - | 4 | 0 | 0 | 100% | 1 |
| 2C38_AMP_B_402 | 74% | 69% | 0.084 | 0.924 | 0.32 | 0.72 | - | 1 | 0 | 0 | 96% | 1 |
| 2C38_AMP_F_401 | 74% | 55% | 0.087 | 0.918 | 0.57 | 0.99 | - | 3 | 0 | 0 | 100% | 1 |
| 2C38_AMP_V_403 | 73% | 70% | 0.077 | 0.912 | 0.27 | 0.71 | - | 1 | 1 | 0 | 96% | 1 |
| 2C38_AMP_J_402 | 73% | 69% | 0.081 | 0.916 | 0.35 | 0.68 | - | - | 0 | 0 | 96% | 1 |
| 2C38_AMP_V_402 | 72% | 62% | 0.084 | 0.917 | 0.49 | 0.81 | - | - | 0 | 0 | 96% | 1 |
| 2C38_AMP_B_404 | 72% | 63% | 0.09 | 0.922 | 0.38 | 0.86 | - | 2 | 2 | 0 | 96% | 1 |
| 2C38_AMP_B_401 | 71% | 54% | 0.085 | 0.905 | 0.6 | 1.03 | - | 3 | 2 | 0 | 100% | 1 |
| 2C38_AMP_X_402 | 70% | 59% | 0.081 | 0.908 | 0.44 | 0.98 | - | 1 | 0 | 0 | 96% | 1 |
| 2C38_AMP_N_402 | 69% | 73% | 0.091 | 0.912 | 0.43 | 0.48 | - | - | 0 | 0 | 96% | 1 |
| 2C38_AMP_X_403 | 68% | 72% | 0.082 | 0.902 | 0.38 | 0.56 | - | - | 0 | 0 | 96% | 1 |
| 2C38_AMP_X_404 | 67% | 72% | 0.097 | 0.907 | 0.38 | 0.56 | - | - | 1 | 0 | 100% | 1 |
| 2C38_AMP_F_402 | 66% | 64% | 0.091 | 0.902 | 0.43 | 0.78 | - | - | 0 | 0 | 96% | 1 |
| 2C38_AMP_H_401 | 65% | 65% | 0.079 | 0.879 | 0.53 | 0.64 | - | 1 | 0 | 0 | 100% | 1 |
| 2C38_AMP_J_404 | 65% | 57% | 0.096 | 0.905 | 0.41 | 1.07 | - | 3 | 3 | 0 | 96% | 1 |
| 2C38_AMP_N_404 | 65% | 63% | 0.098 | 0.906 | 0.38 | 0.87 | - | 2 | 2 | 0 | 96% | 1 |
| 2C38_AMP_F_404 | 64% | 60% | 0.093 | 0.9 | 0.4 | 0.97 | - | 3 | 3 | 0 | 96% | 1 |
| 2C38_AMP_N_401 | 63% | 60% | 0.096 | 0.889 | 0.66 | 0.72 | - | 1 | 0 | 0 | 100% | 1 |
| 2C38_AMP_F_403 | 61% | 76% | 0.083 | 0.878 | 0.4 | 0.44 | - | - | 2 | 0 | 96% | 1 |
| 2C38_AMP_B_403 | 60% | 62% | 0.08 | 0.872 | 0.27 | 1.02 | - | 2 | 1 | 0 | 96% | 1 |
| 5WSC_AMP_C_501 | 100% | 21% | 0.015 | 0.999 | 1.41 | 1.79 | 5 | 10 | 3 | 0 | 100% | 1 |
| 5WSB_AMP_C_501 | 100% | 21% | 0.017 | 0.998 | 1.39 | 1.81 | 4 | 10 | 1 | 0 | 100% | 1 |
| 9XWU_AMP_A_301 | 100% | 74% | 0.018 | 0.997 | 0.43 | 0.47 | - | - | 0 | 0 | 100% | 1 |
| 7N1R_AMP_A_715 | 100% | 18% | 0.018 | 0.996 | 1.53 | 1.85 | 4 | 10 | 0 | 0 | 100% | 1 |
| 5WS9_AMP_B_503 | 100% | 20% | 0.021 | 0.997 | 1.48 | 1.79 | 5 | 11 | 1 | 0 | 100% | 1 |














