PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 2DGL designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2DGL_PLP_B_500 | 97% | 36% | 0.059 | 0.986 | 1.04 | 1.35 | 1 | 5 | 0 | 0 | 100% | 1 |
| 2DGL_PLP_E_502 | 95% | 38% | 0.067 | 0.978 | 0.93 | 1.36 | - | 5 | 0 | 0 | 100% | 1 |
| 2DGL_PLP_F_502 | 94% | 38% | 0.073 | 0.979 | 0.9 | 1.4 | - | 4 | 0 | 0 | 100% | 1 |
| 2DGL_PLP_D_501 | 91% | 40% | 0.074 | 0.968 | 0.74 | 1.45 | - | 4 | 0 | 0 | 100% | 1 |
| 2DGL_PLP_A_500 | 88% | 36% | 0.089 | 0.971 | 0.97 | 1.43 | 1 | 5 | 0 | 0 | 100% | 1 |
| 2DGL_PLP_C_501 | 81% | 37% | 0.099 | 0.955 | 0.93 | 1.4 | - | 5 | 1 | 0 | 100% | 1 |
| 1XEY_PLP_B_500 | 99% | 11% | 0.044 | 0.989 | 1.97 | 2.09 | 4 | 7 | 2 | 0 | 100% | 1 |
| 1PMM_PLP_B_500 | 95% | 39% | 0.059 | 0.968 | 0.77 | 1.5 | - | 6 | 1 | 0 | 100% | 1 |
| 2DGK_PLP_A_1500 | 94% | 38% | 0.064 | 0.969 | 1.06 | 1.25 | 1 | 3 | 1 | 0 | 100% | 1 |
| 2DGM_PLP_E_502 | 89% | 35% | 0.074 | 0.958 | 0.94 | 1.49 | - | 6 | 1 | 0 | 100% | 1 |
| 1WBJ_PLP_B_1392 | 100% | 26% | 0.01 | 0.999 | 1.31 | 1.6 | 1 | 2 | 0 | 0 | 100% | 1 |
| 3L6C_PLP_A_350 | 100% | 26% | 0.015 | 0.999 | 1.15 | 1.75 | 2 | 6 | 0 | 0 | 100% | 1 |
| 5CE8_PLP_A_301 | 100% | 9% | 0.013 | 0.999 | 3.01 | 1.47 | 6 | 3 | 1 | 0 | 100% | 1 |
| 7KMC_PLP_B_401 | 100% | 45% | 0.014 | 0.999 | 0.93 | 1.08 | 1 | 2 | 0 | 0 | 100% | 1 |
| 1ASM_PLP_A_410 | 100% | 15% | 0.017 | 0.998 | 1.78 | 1.89 | 4 | 6 | 3 | 0 | 100% | 1 |
