VD3: (1S,3Z)-3-[(2E)-2-[(1R,3AR,7AS)-7A-METHYL-1-[(2R)-6-METHYLHEPTAN-2-YL]-2,3,3A,5,6,7-HEXAHYDRO-1H-INDEN-4-YLIDENE]ETHYLI
DENE]-4-METHYLIDENE-CYCLOHEXAN-1-OL
VD3 is a Ligand Of Interest in 2GJ5 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2GJ5_VD3_A_164 | 13% | 0% | 0.177 | 0.723 | 3.19 | 5.87 | 16 | 25 | 7 | 0 | 100% | 0.5 |
| 2GJ5_VD3_A_163 | 7% | 0% | 0.165 | 0.624 | 3.29 | 5.74 | 16 | 22 | 4 | 0 | 100% | 0.5 |
| 3C6G_VD3_B_700 | 69% | 7% | 0.118 | 0.934 | 1.82 | 2.82 | 6 | 16 | 18 | 0 | 100% | 1 |
| 6T0G_VD3_A_502 | 67% | 14% | 0.08 | 0.94 | 0.93 | 2.73 | - | 11 | 0 | 0 | 71% | 1 |
| 8VXG_VD3_A_502 | 48% | 12% | 0.133 | 0.874 | 1.71 | 2.25 | 5 | 14 | 8 | 0 | 100% | 1 |
| 3VRM_VD3_A_502 | 32% | 17% | 0.195 | 0.872 | 0.83 | 2.58 | 1 | 14 | 14 | 0 | 100% | 0.5 |
| 3A50_VD3_C_2001 | 15% | 23% | 0.228 | 0.802 | 0.94 | 2.07 | 1 | 10 | 3 | 0 | 100% | 1 |
