GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 2H7V designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2H7V_GDP_A_200 | 85% | 36% | 0.105 | 0.969 | 1.1 | 1.4 | 1 | 4 | 0 | 0 | 100% | 1 |
| 2H7V_GDP_B_200 | 79% | 35% | 0.108 | 0.952 | 0.95 | 1.59 | 1 | 7 | 0 | 0 | 100% | 1 |
| 2P2L_GDP_A_200 | 99% | 44% | 0.059 | 0.987 | 1.14 | 1.02 | 1 | 2 | 0 | 0 | 100% | 1 |
| 1HE1_GDP_C_200 | 95% | 32% | 0.085 | 0.989 | 1.3 | 1.41 | 4 | 5 | 0 | 0 | 100% | 1 |
| 5O33_GDP_A_203 | 91% | 45% | 0.073 | 0.961 | 0.96 | 1.17 | 1 | 2 | 1 | 0 | 100% | 0.79 |
| 2W2T_GDP_A_1181 | 84% | 28% | 0.113 | 0.977 | 1.03 | 1.84 | 2 | 8 | 1 | 0 | 100% | 1 |
| 1DS6_GDP_A_194 | 81% | 4% | 0.121 | 0.975 | 2.79 | 2.92 | 10 | 10 | 0 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 2CXX_GDP_B_2401 | 100% | 29% | 0.031 | 0.989 | 1.26 | 1.57 | 1 | 3 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 5KY2_GDP_A_403 | 100% | 48% | 0.036 | 0.989 | 0.98 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 8CNJ_GDP_B_201 | 100% | 56% | 0.04 | 0.992 | 0.91 | 0.77 | 1 | - | 0 | 0 | 100% | 1 |
