UTP: URIDINE 5'-TRIPHOSPHATE
UTP is a Ligand Of Interest in 2IKF designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2IKF_UTP_A_501 | 92% | 36% | 0.086 | 0.976 | 1.33 | 1.21 | 2 | 2 | 1 | 0 | 100% | 1 |
2Q0F_UTP_A_501 | 88% | 38% | 0.106 | 0.981 | 1.38 | 1.04 | 2 | - | 1 | 0 | 100% | 1 |
5KAL_UTP_A_501 | 67% | 5% | 0.164 | 0.974 | 4.4 | 1.03 | 8 | 2 | 0 | 0 | 100% | 1 |
3HIY_UTP_B_502 | 100% | 19% | 0.028 | 0.994 | 1.43 | 2.03 | 2 | 6 | 1 | 0 | 100% | 1 |
4JST_UTP_B_202 | 98% | 24% | 0.052 | 0.978 | 0.97 | 2.09 | 1 | 3 | 0 | 0 | 100% | 1 |
5VZE_UTP_A_505 | 97% | 36% | 0.066 | 0.983 | 1.1 | 1.4 | 1 | 3 | 0 | 0 | 100% | 1 |
7X4Q_UTP_B_401 | 96% | 6% | 0.081 | 0.988 | 3.79 | 1.25 | 5 | 2 | 0 | 0 | 100% | 1 |
5VZH_UTP_A_506 | 96% | 45% | 0.081 | 0.988 | 0.93 | 1.17 | 1 | 2 | 0 | 0 | 100% | 1 |