NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 2PM8 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2PM8_NAG_A_602 | 42% | 27% | 0.176 | 0.896 | 0.82 | 2.1 | 1 | 2 | 0 | 0 | 100% | 0.9333 |
2PM8_NAG_B_601 | 33% | 45% | 0.162 | 0.853 | 0.56 | 1.55 | - | 5 | 3 | 0 | 93% | 0.9333 |
2PM8_NAG_B_602 | 24% | 61% | 0.209 | 0.835 | 0.57 | 0.91 | - | - | 0 | 0 | 100% | 0.9333 |
2PM8_NAG_A_601 | 22% | 46% | 0.235 | 0.849 | 0.68 | 1.39 | - | 3 | 0 | 0 | 100% | 0.9333 |
2PM8_NAG_A_603 | 3% | 34% | 0.374 | 0.732 | 0.56 | 1.99 | - | 3 | 0 | 0 | 100% | 0.9333 |
5DYW_NAG_A_625 | 55% | 54% | 0.134 | 0.9 | 0.64 | 1.11 | 1 | 1 | 0 | 1 | 100% | 0.9333 |
6F7Q_NAG_B_611 | 51% | 56% | 0.137 | 0.89 | 0.82 | 0.89 | 1 | 1 | 0 | 0 | 100% | 0.896 |
7Q1P_NAG_A_603 | 49% | 45% | 0.122 | 0.867 | 1.1 | 1.03 | 1 | 1 | 0 | 0 | 100% | 0.9333 |
1P0I_NAG_A_538 | 48% | 58% | 0.135 | 0.877 | 0.77 | 0.83 | - | - | 0 | 0 | 100% | 0.6667 |
7Q1O_NAG_A_603 | 45% | 44% | 0.143 | 0.874 | 1.31 | 0.87 | 1 | 1 | 0 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC6_NAG_A_500 | 100% | 67% | 0.041 | 0.988 | 0.46 | 0.8 | - | 1 | 0 | 0 | 100% | 0.9333 |
1UWC_NAG_A_262 | 100% | 54% | 0.046 | 0.99 | 0.83 | 0.93 | - | - | 0 | 0 | 100% | 0.9333 |
6ZE6_NAG_B_703 | 100% | 52% | 0.044 | 0.984 | 0.78 | 1.07 | - | 2 | 0 | 0 | 100% | 0.8667 |
6ZE2_NAG_B_704 | 99% | 56% | 0.042 | 0.979 | 0.73 | 0.95 | - | 1 | 0 | 0 | 100% | 0.9333 |