NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 2Q9O designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2Q9O_NAG_B_1002Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2Q9O_NAG_B_1002Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter2Q9O_NAG_B_1002Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2Q9O_NAG_B_1002 80% 44% 0.09 0.9370.88 1.26 1 200100%1
2Q9O_NAG_A_1001 70% 20% 0.104 0.9211.05 2.33 1 800100%1
2Q9O_NAG_B_1001 61% 38% 0.119 0.9070.81 1.58 - 300100%1
2Q9O_NAG_A_1004 54% 40% 0.138 0.9010.6 1.7 - 400100%1
2Q9O_NAG_A_1005 5% 41% 0.29 0.7110.91 1.36 1 200100%1
3FU7_NAG_B_1750 77% 51% 0.092 0.930.6 1.26 - 200100%1
3QPK_NAG_B_700 63% 58% 0.109 0.9040.63 0.97 - -00100%1
1GW0_NAG_B_621 60% 71% 0.129 0.9150.5 0.63 - -00100%1
3FU8_NAG_B_1750 56% 41% 0.12 0.890.71 1.55 - 210100%1
2IH9_NAG_B_750 43% 67% 0.14 0.8610.51 0.74 - -00100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1