GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 2QF2 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
2QF2_GDP_A_702 90% 49% 0.082 0.9660.9 1.06 - 300100%0.7
2QF2_GDP_A_703 86% 45% 0.097 0.9670.96 1.17 1 430100%0.3
2QF2_GDP_B_802 81% 47% 0.096 0.9490.84 1.18 - 400100%1
3DTB_GDP_A_800 98% 50% 0.058 0.9840.85 1.06 1 200100%0.8
5FH5_GDP_A_703 90% 45% 0.088 0.9720.9 1.22 1 200100%0.7
3MOH_GDP_A_1000 88% 25% 0.09 0.9671.2 1.84 1 800100%1
7L3M_GDP_A_704 84% 38% 0.099 0.960.79 1.62 - 800100%1
7L3V_GDP_A_902 70% 41% 0.142 0.9610.86 1.42 1 610100%1
1RRG_GDP_A_183 100% 17% 0.036 0.9972.05 1.56 7 300100%1
2CXX_GDP_B_2401 100% 29% 0.031 0.9891.26 1.57 1 300100%1
4LUC_GDP_A_204 100% 40% 0.036 0.9921.22 1.11 2 200100%1
5YMX_GDP_A_301 100% 54% 0.038 0.9940.92 0.85 1 -20100%1
5KY2_GDP_A_403 100% 48% 0.036 0.9890.98 1.04 1 100100%1