UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 2VS4 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 2VS4_UDP_A_402 | 79% | 10% | 0.09 | 0.939 | 3.04 | 1.29 | 10 | 6 | 0 | 0 | 100% | 1 |
| 2VS4_UDP_B_402 | 67% | 10% | 0.108 | 0.918 | 3.05 | 1.28 | 12 | 5 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_D_401 | 100% | 2% | 0.012 | 0.999 | 3.56 | 2.74 | 15 | 13 | 1 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 5F87_UDP_F_501 | 100% | 27% | 0.015 | 0.999 | 1.18 | 1.64 | 3 | 4 | 0 | 0 | 100% | 1 |