GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 2XKB designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2XKB_GDP_I_900 | 94% | 20% | 0.058 | 0.964 | 1.4 | 1.88 | 2 | 8 | 1 | 0 | 100% | 1 |
| 2XKB_GDP_G_900 | 91% | 26% | 0.062 | 0.956 | 1.1 | 1.78 | 2 | 7 | 0 | 0 | 100% | 1 |
| 2XKB_GDP_A_900 | 90% | 24% | 0.065 | 0.952 | 1.16 | 1.82 | 3 | 6 | 2 | 0 | 100% | 1 |
| 2XKB_GDP_E_900 | 84% | 21% | 0.07 | 0.937 | 1.3 | 1.86 | 3 | 6 | 0 | 0 | 100% | 1 |
| 2XKB_GDP_B_900 | 83% | 22% | 0.075 | 0.939 | 1.28 | 1.84 | 3 | 10 | 1 | 0 | 100% | 1 |
| 2XKB_GDP_C_900 | 82% | 20% | 0.073 | 0.93 | 1.25 | 1.97 | 3 | 11 | 0 | 0 | 100% | 1 |
| 2XKB_GDP_K_900 | 75% | 25% | 0.085 | 0.919 | 1.21 | 1.71 | 2 | 7 | 0 | 0 | 100% | 1 |
| 2XKB_GDP_J_900 | 55% | 24% | 0.101 | 0.865 | 1.24 | 1.74 | 3 | 6 | 0 | 0 | 100% | 1 |
| 2XKB_GDP_F_900 | 46% | 24% | 0.119 | 0.853 | 1.22 | 1.77 | 3 | 6 | 0 | 0 | 100% | 1 |
| 2XKB_GDP_D_900 | 33% | 25% | 0.126 | 0.805 | 1.18 | 1.76 | 2 | 7 | 3 | 0 | 100% | 1 |
| 2XKB_GDP_L_900 | 30% | 21% | 0.132 | 0.796 | 1.2 | 1.97 | 3 | 11 | 1 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 32% | 0.012 | 0.999 | 1.95 | 0.71 | 1 | 1 | 8 | 0 | 100% | 1 |
| 2CNW_GDP_A_1001 | 100% | 24% | 0.014 | 0.998 | 1.16 | 1.84 | 3 | 9 | 0 | 0 | 100% | 1 |
| 3ZY3_GDP_A_1384 | 100% | 26% | 0.014 | 0.998 | 1.13 | 1.74 | 3 | 8 | 1 | 0 | 100% | 1 |
| 5V9L_GDP_A_201 | 100% | 35% | 0.014 | 0.998 | 1.01 | 1.42 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6EG8_GDP_K_401 | 100% | 25% | 0.015 | 0.999 | 1.16 | 1.76 | 3 | 7 | 0 | 0 | 100% | 1 |
