UGA: URIDINE-5'-DIPHOSPHATE-GLUCURONIC ACID
UGA is a Ligand Of Interest in 2Y0D designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2Y0D_UGA_A_500 | 83% | 39% | 0.128 | 0.986 | 1.06 | 1.3 | 1 | 7 | 0 | 0 | 100% | 1 |
2Y0D_UGA_C_500 | 80% | 44% | 0.135 | 0.985 | 0.87 | 1.3 | 1 | 4 | 0 | 0 | 100% | 1 |
2Y0D_UGA_D_500 | 80% | 37% | 0.136 | 0.985 | 0.95 | 1.5 | 1 | 11 | 0 | 0 | 100% | 1 |
2Y0D_UGA_B_500 | 80% | 34% | 0.129 | 0.977 | 0.9 | 1.69 | - | 12 | 0 | 0 | 100% | 1 |
2Y0C_UGA_D_501 | 98% | 33% | 0.067 | 0.99 | 0.92 | 1.73 | 2 | 9 | 0 | 0 | 100% | 1 |
2Y0E_UGA_D_501 | 96% | 43% | 0.08 | 0.99 | 0.89 | 1.32 | - | 5 | 0 | 0 | 100% | 1 |
2QG4_UGA_G_501 | 99% | 36% | 0.059 | 0.989 | 1.51 | 1.04 | 3 | 3 | 0 | 0 | 100% | 1 |
6KV9_UGA_A_402 | 98% | 12% | 0.059 | 0.985 | 2.66 | 1.46 | 5 | 9 | 1 | 0 | 100% | 1 |
6ZLD_UGA_A_402 | 97% | 7% | 0.06 | 0.978 | 1.71 | 3.11 | 4 | 9 | 3 | 0 | 100% | 1 |
6ZLK_UGA_C_402 | 92% | 7% | 0.082 | 0.974 | 1.45 | 3.27 | 3 | 5 | 2 | 0 | 100% | 0.5 |