UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE
UMP is a Ligand Of Interest in 2YAZ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
2YAZ_UMP_E_1266 | 86% | 26% | 0.111 | 0.981 | 0.95 | 2.03 | 1 | 7 | 0 | 0 | 100% | 1 |
2YAZ_UMP_D_1265 | 86% | 34% | 0.104 | 0.972 | 0.86 | 1.71 | 1 | 5 | 0 | 0 | 100% | 1 |
2YAZ_UMP_B_1265 | 85% | 33% | 0.1 | 0.966 | 0.97 | 1.65 | 1 | 5 | 0 | 0 | 100% | 1 |
2YAZ_UMP_A_1265 | 75% | 27% | 0.116 | 0.949 | 0.88 | 2.05 | 1 | 6 | 1 | 0 | 100% | 1 |
3TPY_UMP_A_154 | 100% | 40% | 0.041 | 0.993 | 0.89 | 1.44 | 1 | 5 | 0 | 0 | 100% | 0.3 |
3TQ4_UMP_A_777 | 100% | 32% | 0.038 | 0.99 | 1.04 | 1.65 | 1 | 8 | 0 | 0 | 100% | 0.8 |
3TQ5_UMP_A_777 | 100% | 22% | 0.046 | 0.989 | 1.35 | 1.9 | 3 | 6 | 0 | 0 | 100% | 1 |
3TQ3_UMP_A_777 | 100% | 38% | 0.049 | 0.99 | 0.91 | 1.5 | 1 | 5 | 0 | 0 | 100% | 0.3 |
3TRN_UMP_A_777 | 99% | 30% | 0.047 | 0.987 | 1.2 | 1.58 | 2 | 6 | 0 | 0 | 100% | 1 |