NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 2YP1 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2YP1_NAG_D_411 | 64% | 60% | 0.106 | 0.903 | 0.55 | 0.83 | - | - | 0 | 0 | 100% | 1 |
| 2YP1_NAG_D_391 | 60% | 45% | 0.105 | 0.888 | 0.54 | 1.45 | - | 4 | 0 | 0 | 100% | 1 |
| 2YP1_NAG_C_381 | 39% | 45% | 0.124 | 0.83 | 0.63 | 1.37 | - | 2 | 1 | 0 | 100% | 1 |
| 2YP1_NAG_D_381 | 35% | 61% | 0.128 | 0.814 | 0.65 | 0.7 | - | - | 0 | 0 | 100% | 1 |
| 9JLH_NAG_A_403 | 97% | 22% | 0.05 | 0.973 | 0.84 | 2.26 | - | 3 | 2 | 0 | 100% | 1 |
| 5OY1_NAG_A_407 | 97% | 60% | 0.049 | 0.97 | 0.41 | 0.95 | - | 1 | 0 | 0 | 100% | 1 |
| 6EKY_NAG_A_407 | 97% | 63% | 0.053 | 0.974 | 0.42 | 0.84 | - | 1 | 0 | 0 | 100% | 1 |
| 6EL0_NAG_A_407 | 95% | 51% | 0.054 | 0.967 | 0.49 | 1.25 | - | 1 | 0 | 0 | 100% | 1 |
| 6EL4_NAG_A_407 | 95% | 59% | 0.055 | 0.966 | 0.42 | 0.97 | - | 1 | 0 | 0 | 100% | 1 |
| 2QFR_NAG_B_451 | 100% | 64% | 0.013 | 0.998 | 0.49 | 0.72 | - | 1 | 0 | 0 | 100% | 1 |
| 5LDS_NAG_C_1003 | 100% | 66% | 0.016 | 0.997 | 0.54 | 0.62 | - | - | 3 | 0 | 100% | 1 |
| 7DDF_NAG_B_401 | 100% | 84% | 0.016 | 0.996 | 0.21 | 0.49 | - | - | 0 | 0 | 100% | 1 |
| 2HQM_NAG_A_1301 | 100% | 62% | 0.018 | 0.996 | 0.59 | 0.7 | - | - | 0 | 0 | 100% | 1 |
| 3H0C_NAG_A_796 | 100% | 54% | 0.02 | 0.995 | 0.47 | 1.12 | - | 1 | 0 | 0 | 100% | 1 |
