NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 2PM8 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2PM8_NAG_A_602 | 42% | 25% | 0.176 | 0.896 | 0.82 | 2.1 | 1 | 2 | 0 | 0 | 100% | 1 |
| 2PM8_NAG_B_601 | 33% | 42% | 0.162 | 0.853 | 0.56 | 1.55 | - | 5 | 3 | 0 | 93% | 1 |
| 2PM8_NAG_B_602 | 22% | 57% | 0.209 | 0.835 | 0.57 | 0.91 | - | - | 0 | 0 | 100% | 1 |
| 2PM8_NAG_A_601 | 20% | 43% | 0.235 | 0.849 | 0.68 | 1.39 | - | 3 | 0 | 0 | 100% | 1 |
| 2PM8_NAG_A_603 | 3% | 32% | 0.374 | 0.732 | 0.56 | 1.99 | - | 3 | 0 | 0 | 100% | 1 |
| 5DYT_NAG_B_606 | 63% | 67% | 0.091 | 0.883 | 0.5 | 0.62 | - | 1 | 1 | 0 | 100% | 1 |
| 5LKR_NAG_B_608 | 58% | 64% | 0.094 | 0.869 | 0.56 | 0.67 | - | 1 | 0 | 0 | 100% | 1 |
| 5DYW_NAG_A_625 | 54% | 51% | 0.134 | 0.9 | 0.64 | 1.11 | 1 | 1 | 0 | 1 | 100% | 1 |
| 7Q1P_NAG_A_603 | 49% | 43% | 0.122 | 0.867 | 1.1 | 1.03 | 1 | 1 | 0 | 0 | 100% | 1 |
| 1P0I_NAG_A_538 | 48% | 55% | 0.135 | 0.877 | 0.77 | 0.83 | - | - | 0 | 0 | 100% | 0.714 |
| 5LDS_NAG_C_1003 | 100% | 65% | 0.016 | 0.997 | 0.55 | 0.64 | - | - | 3 | 0 | 100% | 1 |
| 3H0C_NAG_A_796 | 100% | 55% | 0.02 | 0.995 | 0.47 | 1.12 | - | 1 | 0 | 0 | 100% | 1 |
| 5O5D_NAG_B_501 | 100% | 60% | 0.02 | 0.995 | 0.38 | 0.97 | - | 1 | 0 | 0 | 100% | 1 |
| 9OAR_NAG_C_202 | 100% | 52% | 0.021 | 0.994 | 0.68 | 1.06 | - | 1 | 0 | 0 | 100% | 1 |
| 6MUG_NAG_G_629 | 100% | 72% | 0.022 | 0.994 | 0.35 | 0.58 | - | - | 0 | 0 | 100% | 1 |
