Ligand validation:3DTU

TRD: TRIDECANE

TRD is a Ligand Of Interest in 3DTU designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
3DTU_TRD_D_7	46%	77%	0.148	0.885	0.24	0.58	-	-	2	100%	1
3DTU_TRD_A_1506	39%	80%	0.177	0.887	0.24	0.52	-	-	3	100%	1
3DTU_TRD_D_288	25%	85%	0.19	0.89	0.24	0.44	-	-	0	69%	1
3DTU_TRD_C_577	23%	83%	0.18	0.805	0.29	0.42	-	-	1	100%	1
3DTU_TRD_A_1504	22%	82%	0.235	0.861	0.28	0.45	-	-	4	100%	1
3DTU_TRD_B_1023	21%	84%	0.181	0.855	0.25	0.45	-	-	1	69%	1
3DTU_TRD_C_584	14%	84%	0.208	0.855	0.1	0.58	-	-	12	54%	1
3DTU_TRD_C_578	13%	84%	0.219	0.802	0.3	0.39	-	-	0	85%	1
3DTU_TRD_B_1031	12%	86%	0.231	0.827	0.28	0.37	-	-	0	69%	1
3DTU_TRD_D_12	12%	85%	0.289	0.857	0.27	0.41	-	-	0	85%	0.75
3DTU_TRD_B_1012	11%	84%	0.255	0.842	0.26	0.43	-	-	0	69%	1
3DTU_TRD_A_1010	10%	80%	0.308	0.857	0.25	0.51	-	-	0	85%	0.75
3DTU_TRD_A_1009	9%	86%	0.235	0.827	0.23	0.41	-	-	0	54%	1
3DTU_TRD_C_583	8%	85%	0.26	0.842	0.22	0.45	-	-	0	54%	1
3DTU_TRD_D_23	5%	86%	0.294	0.816	0.22	0.44	-	-	0	54%	0.75
3DTU_TRD_A_1014	4%	86%	0.391	0.894	0.22	0.43	-	-	0	54%	0.75
3DTU_TRD_C_579	4%	89%	0.307	0.781	0.26	0.31	-	-	0	54%	1
3DTU_TRD_C_580	4%	84%	0.36	0.802	0.25	0.45	-	-	0	69%	0.75
3DTU_TRD_A_1013	2%	88%	0.3	0.712	0.28	0.31	-	-	0	54%	1
3DTU_TRD_C_582	2%	87%	0.346	0.738	0.25	0.39	-	-	0	54%	0.75
3DTU_TRD_A_1505	2%	82%	0.392	0.726	0.26	0.47	-	-	0	85%	0.75
3DTU_TRD_A_1015	2%	80%	0.394	0.702	0.27	0.5	-	-	0	85%	0.75
3DTU_TRD_C_581	2%	80%	0.423	0.73	0.27	0.5	-	-	0	85%	0.75
6PW0_TRD_D_303	43%	70%	0.148	0.927	0.12	0.85	-	-	0	69%	1
6PW1_TRD_D_301	41%	72%	0.141	0.913	0.12	0.81	-	-	0	69%	1
2GSM_TRD_A_5007	40%	82%	0.15	0.862	0.22	0.51	-	-	2	100%	1
3OMA_TRD_D_3	31%	78%	0.206	0.882	0.2	0.59	-	-	1	100%	1
3OMI_TRD_D_303	29%	76%	0.192	0.853	0.21	0.63	-	-	1	100%	1
6GA3_TRD_A_303	59%	71%	0.109	0.891	0.12	0.84	-	-	0	100%	1
4ZR1_TRD_A_410	48%	71%	0.18	0.926	0.12	0.84	-	-	3	100%	1
6LPK_TRD_A_2422	41%	98%	0.14	0.853	0.14	0.14	-	-	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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.id_divider{ color: #ccc; padding: 0 10px 0 10px; } .extended_id_info{ color: #ccc; font-size: 18px; position: relative; top: -10px; left: 4px; } 3DTU | pdb_00003dtu

TRD: TRIDECANE

TRD is a Ligand Of Interest in 3DTU designated by the RCSB

3DTU | pdb_00003dtu