Ligand validation:3HB8

UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE

UMP is a Ligand Of Interest in 3HB8 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3HB8_UMP_D_565	35%	37%	0.243	0.934	1.36	1.1	2	2	2	0	100%	0.896
3HB8_UMP_A_314	23%	35%	0.313	0.936	1.35	1.22	2	2	2	0	100%	0.856
3HB8_UMP_C_365	0%	32%	0.678	0.696	1.44	1.25	2	2	0	0	100%	0.39
5X66_UMP_A_401	96%	15%	0.076	0.987	1.95	1.86	7	6	0	0	100%	1
5X67_UMP_B_401	95%	18%	0.082	0.985	1.86	1.67	4	5	0	0	100%	1
5X5D_UMP_B_401	93%	7%	0.084	0.979	2.48	2.29	8	9	1	0	100%	1
5X5Q_UMP_E_401	92%	10%	0.091	0.983	2.44	1.96	6	6	0	0	100%	1
1HVY_UMP_D_317	90%	7%	0.094	0.976	3.48	1.49	7	5	0	0	100%	1
3TPY_UMP_A_154	100%	40%	0.041	0.993	0.89	1.44	1	5	0	0	100%	0.3
3TQ4_UMP_A_777	100%	32%	0.038	0.99	1.04	1.65	1	8	0	0	100%	0.8
3TQ5_UMP_A_777	100%	22%	0.046	0.989	1.35	1.9	3	6	0	0	100%	1
3TQ3_UMP_A_777	100%	38%	0.049	0.99	0.91	1.5	1	5	0	0	100%	0.3
3TRN_UMP_A_777	99%	30%	0.047	0.987	1.2	1.58	2	6	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.