3NGB
NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 3NGB designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
3NGB_NAG_A_501 | 81% | 66% | 0.122 | 0.973 | 0.55 | 0.75 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_A_504 | 77% | 62% | 0.129 | 0.97 | 0.56 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_G_508 | 74% | 67% | 0.12 | 0.949 | 0.55 | 0.71 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_G_502 | 73% | 67% | 0.133 | 0.96 | 0.54 | 0.71 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_G_510 | 70% | 69% | 0.141 | 0.958 | 0.55 | 0.66 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_I_509 | 68% | 68% | 0.135 | 0.948 | 0.56 | 0.67 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_A_506 | 67% | 64% | 0.155 | 0.963 | 0.54 | 0.84 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_D_507 | 66% | 68% | 0.163 | 0.968 | 0.57 | 0.66 | - | - | 1 | 0 | 100% | 0.9333 |
3NGB_NAG_D_504 | 61% | 66% | 0.163 | 0.952 | 0.59 | 0.7 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_A_508 | 58% | 70% | 0.142 | 0.919 | 0.53 | 0.63 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_A_503 | 57% | 65% | 0.124 | 0.899 | 0.52 | 0.82 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_G_507 | 57% | 67% | 0.132 | 0.905 | 0.54 | 0.72 | - | - | 1 | 0 | 100% | 0.9333 |
3NGB_NAG_G_505 | 56% | 65% | 0.157 | 0.929 | 0.54 | 0.81 | - | 1 | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_D_506 | 56% | 69% | 0.166 | 0.937 | 0.56 | 0.63 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_G_506 | 55% | 63% | 0.162 | 0.931 | 0.49 | 0.91 | - | 1 | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_G_504 | 55% | 58% | 0.202 | 0.972 | 0.54 | 1.04 | - | 1 | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_D_502 | 54% | 69% | 0.194 | 0.96 | 0.55 | 0.65 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_D_510 | 52% | 67% | 0.169 | 0.927 | 0.57 | 0.7 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_D_512 | 52% | 71% | 0.146 | 0.903 | 0.55 | 0.57 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_I_502 | 51% | 66% | 0.172 | 0.926 | 0.52 | 0.78 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_A_510 | 51% | 67% | 0.178 | 0.932 | 0.56 | 0.7 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_I_506 | 50% | 62% | 0.179 | 0.931 | 0.5 | 0.94 | - | 1 | 1 | 0 | 100% | 0.9333 |
3NGB_NAG_A_507 | 50% | 64% | 0.157 | 0.908 | 0.51 | 0.85 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_I_504 | 46% | 66% | 0.223 | 0.962 | 0.55 | 0.74 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_I_508 | 45% | 69% | 0.166 | 0.896 | 0.57 | 0.61 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_A_511 | 42% | 67% | 0.17 | 0.889 | 0.52 | 0.76 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_I_510 | 41% | 65% | 0.211 | 0.925 | 0.52 | 0.82 | - | 1 | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_A_502 | 39% | 66% | 0.247 | 0.957 | 0.54 | 0.78 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_G_503 | 38% | 67% | 0.177 | 0.877 | 0.54 | 0.71 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_I_507 | 37% | 70% | 0.223 | 0.92 | 0.55 | 0.59 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_I_505 | 36% | 68% | 0.193 | 0.885 | 0.57 | 0.67 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_I_511 | 35% | 42% | 0.207 | 0.896 | 0.58 | 1.63 | - | 2 | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_D_511 | 32% | 67% | 0.224 | 0.899 | 0.54 | 0.73 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_G_509 | 32% | 68% | 0.238 | 0.913 | 0.59 | 0.66 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_D_508 | 29% | 67% | 0.231 | 0.892 | 0.53 | 0.75 | - | 1 | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_D_505 | 27% | 70% | 0.23 | 0.878 | 0.58 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_G_511 | 26% | 67% | 0.22 | 0.863 | 0.56 | 0.71 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_D_509 | 26% | 68% | 0.216 | 0.856 | 0.55 | 0.69 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_I_503 | 23% | 70% | 0.188 | 0.813 | 0.55 | 0.59 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_A_512 | 22% | 70% | 0.288 | 0.906 | 0.54 | 0.62 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_G_501 | 18% | 71% | 0.276 | 0.862 | 0.52 | 0.6 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_A_505 | 16% | 67% | 0.268 | 0.835 | 0.54 | 0.74 | - | 1 | 1 | 0 | 100% | 0.9333 |
3NGB_NAG_I_501 | 7% | 60% | 0.325 | 0.774 | 0.53 | 1 | - | 2 | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_A_509 | 3% | 71% | 0.432 | 0.77 | 0.56 | 0.57 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_D_503 | 3% | 70% | 0.47 | 0.789 | 0.54 | 0.62 | - | - | 0 | 0 | 100% | 0.9333 |
3NGB_NAG_D_501 | 1% | 68% | 0.458 | 0.687 | 0.54 | 0.7 | - | - | 0 | 0 | 100% | 0.9333 |
5F9W_NAG_A_510 | 100% | 88% | 0.023 | 0.994 | 0.24 | 0.43 | - | - | 0 | 0 | 100% | 0.9333 |
4YFL_NAG_E_507 | 98% | 70% | 0.061 | 0.985 | 0.48 | 0.66 | - | - | 0 | 0 | 100% | 0.9333 |
3SE8_NAG_G_734 | 94% | 68% | 0.063 | 0.961 | 0.56 | 0.68 | - | - | 0 | 0 | 100% | 0.9333 |
4LSQ_NAG_G_503 | 93% | 57% | 0.065 | 0.96 | 0.58 | 1.07 | - | 1 | 0 | 0 | 100% | 0.9333 |
7SX7_NAG_A_508 | 92% | 71% | 0.073 | 0.964 | 0.28 | 0.84 | - | 1 | 0 | 0 | 100% | 0.9333 |
3H0C_NAG_A_794 | 100% | 56% | 0.021 | 0.995 | 0.61 | 1.08 | - | 1 | 0 | 0 | 100% | 0.9333 |
5LDS_NAG_B_1007 | 100% | 67% | 0.022 | 0.995 | 0.48 | 0.79 | - | - | 0 | 0 | 100% | 0.9333 |
5O5D_NAG_A_601 | 100% | 65% | 0.022 | 0.994 | 0.32 | 0.99 | - | 1 | 0 | 0 | 100% | 0.9333 |
6MUG_NAG_G_629 | 100% | 76% | 0.022 | 0.994 | 0.35 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
3GXM_NAG_A_498 | 100% | 45% | 0.026 | 0.992 | 0.75 | 1.34 | - | 2 | 0 | 0 | 100% | 0.9333 |