DGJ: (2R,3S,4R,5S)-2-(hydroxymethyl)piperidine-3,4,5-triol
DGJ is a Ligand Of Interest in 3THD designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3THD_DGJ_D_900 | 99% | 9% | 0.042 | 0.988 | 1.17 | 3.13 | 1 | 7 | 1 | 0 | 100% | 1 |
| 3THD_DGJ_A_900 | 98% | 10% | 0.052 | 0.985 | 1.26 | 2.85 | 1 | 6 | 0 | 0 | 100% | 1 |
| 3THD_DGJ_B_900 | 96% | 8% | 0.06 | 0.978 | 1.74 | 2.68 | 3 | 6 | 0 | 0 | 100% | 1 |
| 3THD_DGJ_C_900 | 95% | 15% | 0.065 | 0.979 | 1.65 | 2.04 | 3 | 7 | 0 | 0 | 100% | 1 |
| 7QQG_DGJ_B_803 | 92% | 37% | 0.06 | 0.954 | 1.47 | 0.95 | 3 | - | 1 | 0 | 100% | 1 |
| 4FNS_DGJ_D_801 | 88% | 36% | 0.091 | 0.971 | 1.2 | 1.21 | 1 | 1 | 0 | 0 | 100% | 1 |
| 4UFM_DGJ_A_1001 | 84% | 78% | 0.111 | 0.981 | 0.15 | 0.65 | - | - | 0 | 0 | 100% | 1 |
| 4CU8_DGJ_A_1985 | 84% | 36% | 0.114 | 0.984 | 1.3 | 1.13 | 1 | 1 | 1 | 0 | 100% | 1 |
| 4DO5_DGJ_B_509 | 83% | 46% | 0.103 | 0.969 | 0.79 | 1.2 | - | 3 | 0 | 0 | 100% | 1 |
