XYP: beta-D-xylopyranose

XYP is a Ligand Of Interest in 3UG5 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3UG5_XYP_B_487 85% 59% 0.084 0.951.12 0.48 1 -00100%1
3UG5_XYP_D_487 82% 18% 0.093 0.9472.26 1.27 4 200100%1
3UG5_XYP_A_487 77% 33% 0.111 0.951.29 1.38 1 300100%1
3UG5_XYP_E_487 75% 18% 0.1 0.9341.94 1.62 1 300100%1
3UG5_XYP_F_487 70% 20% 0.131 0.9482.03 1.34 2 210100%1
3UG5_XYP_C_487 67% 30% 0.126 0.9341.48 1.3 1 200100%1
3UG5_XYP_D_489 35% 9% 0.227 0.9142.32 2.22 4 300100%1
3UG5_XYP_B_489 34% 11% 0.18 0.8632.74 1.49 5 200100%1
3UG5_XYP_B_488 31% 4% 0.199 0.8662.45 3.09 3 900100%1
3UG5_XYP_D_490 30% 15% 0.221 0.8851.94 1.87 4 300100%1
3UG5_XYP_A_489 16% 5% 0.206 0.7792.99 2.45 4 500100%1
3UG5_XYP_A_488 13% 1% 0.213 0.7554.29 3.61 5 510100%1
3UG5_XYP_D_488 10% 12% 0.275 0.7742.63 1.46 3 300100%1
3UG5_XYP_C_488 9% 7% 0.281 0.7732.61 2.2 3 600100%1
3UG5_XYP_E_488 6% 6% 0.286 0.722.61 2.34 4 700100%1
1OD8_XYP_A_1311 100% 64% 0.047 0.9920.75 0.64 - -00100%1
1V0M_XYP_A_1304 100% 71% 0.035 0.9930.82 0.33 - -0090%0.9
1V0N_XYP_A_1306 98% 60% 0.048 0.9890.76 0.78 - -0090%0.9
1V0L_XYP_A_1305 98% 72% 0.055 0.9920.52 0.57 - -0090%0.9
1FHD_XYP_A_601 96% 72% 0.042 0.970.68 0.41 - -0090%0.9