GDU: GALACTOSE-URIDINE-5'-DIPHOSPHATE
GDU is a Ligand Of Interest in 3UKP designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 3UKP_GDU_D_602 | 100% | 13% | 0.031 | 0.993 | 2.02 | 1.84 | 10 | 13 | 5 | 0 | 100% | 1 |
| 3UKP_GDU_C_602 | 100% | 14% | 0.034 | 0.992 | 1.99 | 1.75 | 10 | 13 | 11 | 0 | 100% | 1 |
| 3UKP_GDU_F_602 | 100% | 14% | 0.034 | 0.992 | 1.95 | 1.83 | 9 | 13 | 12 | 0 | 100% | 0.98 |
| 3UKP_GDU_E_602 | 100% | 15% | 0.035 | 0.992 | 1.96 | 1.75 | 10 | 9 | 15 | 0 | 100% | 0.92 |
| 3UKP_GDU_A_602 | 100% | 14% | 0.037 | 0.991 | 1.95 | 1.82 | 9 | 11 | 12 | 0 | 100% | 1 |
| 3UKP_GDU_B_602 | 99% | 13% | 0.045 | 0.985 | 1.96 | 1.95 | 10 | 13 | 17 | 0 | 100% | 1 |
| 3UKF_GDU_H_802 | 99% | 13% | 0.042 | 0.993 | 1.94 | 1.89 | 12 | 10 | 3 | 0 | 100% | 1 |
| 3UTH_GDU_B_514 | 73% | 15% | 0.118 | 0.95 | 1.7 | 1.93 | 10 | 13 | 0 | 0 | 100% | 0.78 |
| 3UKQ_GDU_D_602 | 35% | 14% | 0.145 | 0.835 | 1.94 | 1.85 | 12 | 10 | 2 | 0 | 100% | 1 |
| 3UKH_GDU_C_521 | 23% | 14% | 0.188 | 0.816 | 2.03 | 1.77 | 12 | 9 | 8 | 0 | 100% | 0.55 |
| 4LW3_GDU_A_402 | 100% | 11% | 0.023 | 0.996 | 2.61 | 1.49 | 16 | 9 | 0 | 0 | 100% | 1 |
| 6GX0_GDU_A_402 | 99% | 36% | 0.038 | 0.987 | 1.15 | 1.25 | 3 | 9 | 0 | 0 | 100% | 0.5 |
| 5M7D_GDU_A_402 | 99% | 40% | 0.044 | 0.984 | 1.11 | 1.11 | 3 | 5 | 0 | 0 | 100% | 1 |
| 4HO9_GDU_B_300 | 98% | 20% | 0.045 | 0.98 | 1.45 | 1.83 | 5 | 11 | 0 | 0 | 100% | 1 |