3VBE | pdb_00003vbe


PLP: PYRIDOXAL-5'-PHOSPHATE

PLP is a Ligand Of Interest in 3VBE designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3VBE_PLP_A_500Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3VBE_PLP_A_500Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3VBE_PLP_A_500 99% 29% 0.048 0.9851.28 1.54 2 400100%1
3VBE_PLP_B_501 96% 2% 0.064 0.9750.96 5.99 1 510100%1
3VBE_PLP_D_401 94% 1% 0.068 0.9691.04 7.73 1 320100%1
3VBE_PLP_C_401 94% 1% 0.075 0.9732.85 5.4 2 340100%1
3CEJ_PLP_A_832 100% 41% 0.021 0.9981.23 1.05 1 280100%1
3CEM_PLP_A_832 100% 41% 0.021 0.9971.24 1.04 2 210100%1
4PPM_PLP_A_902 100% 7% 0.019 0.9982.88 1.91 9 600100%1
1EKV_PLP_A_370 100% 19% 0.019 0.9982 1.45 5 41094%1
3WQC_PLP_B_402 100% 21% 0.026 0.9961.96 1.38 4 400100%1