3VKG


SPM: SPERMINE

SPM is a Ligand Of Interest in 3VKG designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3VKG_SPM_B_9022Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter3VKG_SPM_B_9022Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
3VKG_SPM_B_9022 39% 64% 0.202 0.9070.41 0.96 - -30100%1
3VKG_SPM_B_9018 34% 62% 0.21 0.8930.57 0.86 - -20100%1
3VKG_SPM_A_9012 28% 63% 0.218 0.8690.6 0.82 - -10100%1
3VKG_SPM_A_9016 18% 63% 0.249 0.8330.53 0.89 - -10100%1
8OEX_SPM_A_101 96% 74% 0.072 0.9820.48 0.54 - -00100%1
6E1X_SPM_C_201 93% 57% 0.061 0.9560.57 1.05 - -20100%1
4MJ8_SPM_A_201 84% 64% 0.098 0.960.41 0.97 - -00100%1
4MI4_SPM_A_201 84% 61% 0.096 0.9570.73 0.76 - -00100%1
3P4J_SPM_A_20 82% 75% 0.117 0.9740.34 0.63 - -10100%1