UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 4LK3 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
| 4LK3_UDP_A_502 | 54% | 29% | 0.099 | 0.86 | 1.19 | 1.56 | 4 | 6 | 1 | 0 | 100% | 1 |
| 4LK3_UDP_D_502 | 47% | 25% | 0.11 | 0.845 | 1.22 | 1.71 | 2 | 5 | 2 | 0 | 100% | 1 |
| 4LK3_UDP_B_502 | 39% | 28% | 0.108 | 0.809 | 1.2 | 1.58 | 3 | 5 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 40% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 4M55_UDP_B_502 | 45% | 31% | 0.093 | 0.819 | 1.05 | 1.59 | 2 | 4 | 1 | 0 | 100% | 1 |
| 5F87_UDP_A_501 | 100% | 29% | 0.013 | 0.999 | 1.18 | 1.54 | 2 | 4 | 2 | 0 | 100% | 1 |
| 5V0T_UDP_B_501 | 100% | 69% | 0.014 | 0.999 | 0.43 | 0.61 | - | 1 | 0 | 0 | 100% | 1 |
| 7FGA_UDP_D_401 | 100% | 2% | 0.014 | 0.999 | 3.6 | 2.79 | 15 | 12 | 2 | 0 | 100% | 1 |
| 8X3Q_UDP_D_401 | 100% | 3% | 0.013 | 0.999 | 3.5 | 2.77 | 14 | 14 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.51 | 2.73 | 14 | 12 | 2 | 0 | 100% | 1 |