Ligand validation:4PBU

SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL

SQD is a Ligand Of Interest in 4PBU designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4PBU_SQD_L_101	5%	36%	0.386	0.783	1.08	1.43	4	9	0	0	100%	1
4PBU_SQD_a_402	4%	41%	0.383	0.779	1.06	1.22	3	5	0	0	100%	1
4PBU_SQD_l_101	3%	38%	0.409	0.729	1.04	1.36	4	8	0	0	100%	1
4PBU_SQD_A_613	2%	41%	0.49	0.757	1.05	1.22	3	6	0	0	100%	1
4PBU_SQD_a_411	1%	34%	0.509	0.719	1	1.57	3	10	0	0	100%	1
4PBU_SQD_F_101	0%	32%	0.813	0.833	1.21	1.46	3	7	0	0	80%	1
4PBU_SQD_A_612	0%	36%	0.808	0.659	0.98	1.53	3	11	0	0	100%	1
4PBU_SQD_d_407	0%	33%	0.944	0.711	1.2	1.43	3	7	0	0	80%	1
5V2C_SQD_a_413	94%	21%	0.075	0.976	1.12	2.14	4	12	0	0	100%	1
5GTI_SQD_A_409	91%	29%	0.066	0.95	0.98	1.84	3	13	0	0	100%	1
5WS6_SQD_A_411	87%	32%	0.084	0.954	0.88	1.78	2	12	0	0	100%	1
6DHE_SQD_A_412	78%	20%	0.113	0.961	1.05	2.27	5	14	0	0	96%	1
8IRC_SQD_a_411	77%	29%	0.119	0.96	0.96	1.83	3	13	0	0	100%	1
8IR5_SQD_a_411	76%	31%	0.123	0.958	0.95	1.77	3	13	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.