DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 4TNJ designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4TNJ_DGD_B_620 | 43% | 40% | 0.169 | 0.917 | 0.89 | 1.34 | 1 | 8 | 2 | 0 | 88% | 1 |
| 4TNJ_DGD_a_411 | 38% | 38% | 0.157 | 0.89 | 0.93 | 1.39 | 1 | 8 | 4 | 0 | 85% | 1 |
| 4TNJ_DGD_C_515 | 36% | 40% | 0.165 | 0.898 | 0.97 | 1.27 | 2 | 6 | 3 | 0 | 80% | 1 |
| 4TNJ_DGD_c_515 | 33% | 40% | 0.185 | 0.904 | 0.95 | 1.28 | 1 | 7 | 3 | 0 | 80% | 1 |
| 4TNJ_DGD_C_517 | 32% | 39% | 0.168 | 0.845 | 0.87 | 1.4 | - | 9 | 5 | 0 | 100% | 1 |
| 4TNJ_DGD_A_408 | 32% | 38% | 0.169 | 0.872 | 0.92 | 1.4 | - | 8 | 1 | 0 | 85% | 1 |
| 4TNJ_DGD_b_624 | 28% | 40% | 0.199 | 0.881 | 0.9 | 1.33 | 1 | 6 | 3 | 0 | 88% | 1 |
| 4TNJ_DGD_c_517 | 26% | 39% | 0.207 | 0.855 | 0.87 | 1.39 | - | 9 | 5 | 0 | 100% | 1 |
| 4TNJ_DGD_C_516 | 24% | 37% | 0.158 | 0.801 | 0.9 | 1.43 | 1 | 13 | 5 | 0 | 94% | 1 |
| 4TNJ_DGD_b_601 | 21% | 37% | 0.18 | 0.83 | 1.05 | 1.33 | 3 | 7 | 4 | 0 | 79% | 1 |
| 4TNJ_DGD_c_516 | 20% | 37% | 0.213 | 0.832 | 0.91 | 1.43 | 2 | 12 | 4 | 0 | 94% | 1 |
| 4TNJ_DGD_d_408 | 15% | 39% | 0.195 | 0.773 | 0.91 | 1.34 | 2 | 9 | 1 | 0 | 95% | 1 |
| 4TNJ_DGD_B_625 | 13% | 36% | 0.177 | 0.767 | 1.06 | 1.33 | 3 | 7 | 3 | 0 | 79% | 1 |
| 4TNJ_DGD_D_409 | 9% | 40% | 0.208 | 0.722 | 0.9 | 1.33 | - | 9 | 3 | 0 | 95% | 1 |
| 5V2C_DGD_C_516 | 97% | 40% | 0.047 | 0.983 | 0.91 | 1.29 | 5 | 10 | 0 | 0 | 94% | 1 |
| 5GTI_DGD_h_103 | 94% | 49% | 0.05 | 0.967 | 0.9 | 0.97 | 3 | 3 | 0 | 0 | 94% | 1 |
| 5GTH_DGD_h_102 | 94% | 47% | 0.05 | 0.966 | 0.9 | 1.03 | 4 | 5 | 0 | 0 | 94% | 1 |
| 6JLO_DGD_c_519 | 93% | 48% | 0.067 | 0.981 | 0.83 | 1.05 | 2 | 7 | 6 | 0 | 94% | 1 |
| 8IRF_DGD_C_517 | 91% | 44% | 0.06 | 0.963 | 0.84 | 1.2 | 2 | 6 | 1 | 0 | 94% | 0.5 |
| 7M76_DGD_L_207 | 98% | 40% | 0.05 | 0.984 | 1.05 | 1.18 | 3 | 7 | 3 | 0 | 100% | 1 |
| 1PPR_DGD_O_625 | 92% | 52% | 0.066 | 0.965 | 0.78 | 0.96 | 1 | 5 | 2 | 0 | 100% | 1 |
