SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 4UB8 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4UB8_SQD_A_411 | 45% | 34% | 0.139 | 0.915 | 0.97 | 1.58 | 3 | 11 | 2 | 0 | 100% | 1 |
| 4UB8_SQD_a_411 | 37% | 34% | 0.147 | 0.89 | 0.96 | 1.6 | 3 | 11 | 5 | 0 | 100% | 1 |
| 4UB8_SQD_A_416 | 25% | 41% | 0.15 | 0.831 | 1.05 | 1.15 | 3 | 7 | 3 | 0 | 100% | 1 |
| 4UB8_SQD_b_601 | 22% | 32% | 0.161 | 0.83 | 1.02 | 1.63 | 3 | 10 | 3 | 0 | 100% | 1 |
| 4UB8_SQD_a_402 | 14% | 41% | 0.163 | 0.773 | 1.03 | 1.19 | 3 | 6 | 0 | 0 | 100% | 1 |
| 4UB8_SQD_l_101 | 13% | 37% | 0.177 | 0.787 | 1 | 1.4 | 3 | 9 | 3 | 0 | 100% | 1 |
| 4UB8_SQD_F_101 | 11% | 32% | 0.185 | 0.832 | 1.12 | 1.55 | 3 | 9 | 4 | 0 | 80% | 1 |
| 4UB8_SQD_f_101 | 10% | 33% | 0.19 | 0.823 | 1.18 | 1.44 | 3 | 7 | 4 | 0 | 80% | 1 |
| 5V2C_SQD_A_612 | 85% | 23% | 0.062 | 0.972 | 1.04 | 2.08 | 3 | 14 | 2 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 79% | 29% | 0.066 | 0.95 | 0.98 | 1.84 | 3 | 13 | 2 | 0 | 100% | 1 |
| 5GTH_SQD_A_410 | 78% | 29% | 0.065 | 0.945 | 0.97 | 1.86 | 3 | 12 | 3 | 0 | 100% | 1 |
| 5WS5_SQD_A_410 | 74% | 28% | 0.081 | 0.955 | 0.94 | 1.94 | 3 | 12 | 6 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 73% | 30% | 0.084 | 0.954 | 0.94 | 1.81 | 3 | 13 | 8 | 0 | 100% | 1 |
| 6JLJ_SQD_a_414 | 71% | 34% | 0.081 | 0.944 | 0.97 | 1.59 | 3 | 13 | 2 | 0 | 100% | 1 |
