4V9C
NMY: NEOMYCIN
NMY is a Ligand Of Interest in 4V9C designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
4V9C_NMY_DA_3188 | 64% | 10% | 0.108 | 0.907 | 2.24 | 2.03 | 13 | 24 | 3 | 0 | 100% | 0.79 |
4V9C_NMY_DA_3186 | 58% | 7% | 0.115 | 0.894 | 2.4 | 2.39 | 12 | 15 | 13 | 0 | 100% | 0.66 |
4V9C_NMY_AA_1655 | 54% | 60% | 0.104 | 0.866 | 0.56 | 0.97 | - | 4 | 17 | 0 | 100% | 0.93 |
4V9C_NMY_DA_3185 | 54% | 12% | 0.12 | 0.882 | 2.36 | 1.72 | 12 | 14 | 4 | 0 | 100% | 0.73 |
4V9C_NMY_CA_1672 | 51% | 63% | 0.152 | 0.907 | 0.53 | 0.89 | - | 2 | 3 | 0 | 100% | 0.73 |
4V9C_NMY_DA_3189 | 46% | 8% | 0.138 | 0.873 | 2.24 | 2.32 | 11 | 23 | 5 | 0 | 100% | 0.64 |
4V9C_NMY_BA_3166 | 38% | 9% | 0.156 | 0.859 | 2.21 | 2.22 | 11 | 16 | 11 | 0 | 100% | 0.73 |
4V9C_NMY_DA_3187 | 33% | 14% | 0.106 | 0.784 | 2.34 | 1.51 | 11 | 13 | 2 | 0 | 100% | 0.83 |
4V9C_NMY_BA_3162 | 33% | 59% | 0.153 | 0.831 | 0.49 | 1.05 | - | 5 | 12 | 0 | 100% | 0.78 |
4V9C_NMY_BA_3161 | 33% | 60% | 0.17 | 0.847 | 0.49 | 1.03 | - | 4 | 4 | 0 | 100% | 0.71 |
4V9C_NMY_AA_1656 | 32% | 11% | 0.159 | 0.832 | 2.31 | 1.88 | 12 | 20 | 2 | 0 | 100% | 0.74 |
4V9C_NMY_BA_3163 | 31% | 7% | 0.187 | 0.855 | 2.34 | 2.46 | 10 | 28 | 8 | 0 | 100% | 0.64 |
4V9C_NMY_DA_3184 | 30% | 52% | 0.151 | 0.811 | 0.57 | 1.26 | - | 5 | 12 | 0 | 100% | 0.73 |
4V9C_NMY_BA_3167 | 27% | 10% | 0.149 | 0.795 | 2.32 | 1.97 | 11 | 14 | 1 | 0 | 100% | 0.73 |
4V9C_NMY_BA_3165 | 25% | 57% | 0.181 | 0.816 | 0.5 | 1.12 | - | 5 | 8 | 0 | 100% | 0.7 |
4V9C_NMY_BA_3164 | 23% | 7% | 0.147 | 0.768 | 2.29 | 2.44 | 11 | 26 | 3 | 0 | 100% | 0.73 |
4V9C_NMY_DA_3190 | 18% | 7% | 0.254 | 0.839 | 2.29 | 2.56 | 10 | 25 | 11 | 0 | 100% | 0.57 |
4V9C_NMY_AA_1657 | 17% | 11% | 0.336 | 0.916 | 2.35 | 1.87 | 12 | 18 | 1 | 0 | 100% | 0.59 |
4V57_NMY_CA_1601 | 33% | 23% | 0.216 | 0.895 | 2.03 | 1.19 | 13 | 6 | 0 | 0 | 100% | 0.9 |
4V52_NMY_CA_1601 | 26% | 21% | 0.247 | 0.892 | 2.02 | 1.29 | 12 | 8 | 0 | 0 | 100% | 0.9 |
6P06_NMY_A_305 | 76% | 6% | 0.118 | 0.954 | 4.01 | 1.21 | 17 | 5 | 2 | 0 | 100% | 1 |
6NMM_NMY_A_800 | 72% | 6% | 0.14 | 0.965 | 4.05 | 1.09 | 17 | 3 | 0 | 0 | 100% | 1 |
6MB5_NMY_A_301 | 70% | 7% | 0.105 | 0.921 | 3.79 | 1.08 | 15 | 3 | 0 | 0 | 100% | 1 |
5IQE_NMY_D_600 | 63% | 56% | 0.156 | 0.953 | 0.35 | 1.32 | - | 8 | 1 | 0 | 100% | 1 |
7CS1_NMY_A_301 | 62% | 57% | 0.128 | 0.918 | 0.55 | 1.09 | - | 4 | 0 | 0 | 100% | 1 |