4YDL
NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 4YDL designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
4YDL_NAG_A_503 | 89% | 80% | 0.067 | 0.945 | 0.36 | 0.49 | - | - | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_G_501 | 81% | 89% | 0.098 | 0.95 | 0.28 | 0.35 | - | - | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_G_503 | 80% | 77% | 0.084 | 0.933 | 0.41 | 0.5 | - | - | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_A_501 | 76% | 88% | 0.113 | 0.948 | 0.32 | 0.36 | - | - | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_G_508 | 75% | 81% | 0.094 | 0.925 | 0.35 | 0.47 | - | - | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_G_505 | 70% | 79% | 0.096 | 0.913 | 0.32 | 0.54 | - | - | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_A_508 | 66% | 78% | 0.11 | 0.914 | 0.36 | 0.54 | - | - | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_A_505 | 65% | 75% | 0.116 | 0.916 | 0.37 | 0.61 | - | 1 | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_C_301 | 56% | 86% | 0.119 | 0.89 | 0.18 | 0.53 | - | - | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_G_506 | 55% | 78% | 0.128 | 0.895 | 0.27 | 0.6 | - | - | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_L_301 | 54% | 88% | 0.131 | 0.894 | 0.2 | 0.45 | - | - | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_A_507 | 53% | 80% | 0.144 | 0.906 | 0.32 | 0.51 | - | - | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_A_506 | 51% | 78% | 0.14 | 0.895 | 0.37 | 0.52 | - | - | 1 | 0 | 100% | 0.9333 |
4YDL_NAG_A_504 | 50% | 88% | 0.142 | 0.892 | 0.31 | 0.36 | - | - | 1 | 0 | 100% | 0.9333 |
4YDL_NAG_G_504 | 40% | 76% | 0.148 | 0.858 | 0.57 | 0.38 | 1 | - | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_G_502 | 39% | 81% | 0.162 | 0.87 | 0.36 | 0.46 | - | - | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_G_509 | 33% | 75% | 0.193 | 0.87 | 0.36 | 0.61 | - | 1 | 1 | 0 | 100% | 0.9333 |
4YDL_NAG_G_510 | 23% | 76% | 0.216 | 0.839 | 0.28 | 0.66 | - | 1 | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_A_509 | 22% | 77% | 0.235 | 0.855 | 0.3 | 0.62 | - | 1 | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_G_507 | 22% | 79% | 0.235 | 0.852 | 0.24 | 0.61 | - | 1 | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_A_502 | 7% | 73% | 0.343 | 0.809 | 0.58 | 0.48 | - | - | 0 | 0 | 100% | 0.9333 |
4YDL_NAG_A_510 | 7% | 67% | 0.363 | 0.813 | 0.28 | 0.96 | - | 1 | 0 | 0 | 100% | 0.9333 |
4YFL_NAG_E_507 | 98% | 70% | 0.061 | 0.985 | 0.48 | 0.66 | - | - | 0 | 0 | 100% | 0.9333 |
3SE8_NAG_G_734 | 94% | 68% | 0.063 | 0.961 | 0.56 | 0.68 | - | - | 0 | 0 | 100% | 0.9333 |
7SX7_NAG_A_508 | 92% | 71% | 0.073 | 0.964 | 0.28 | 0.84 | - | 1 | 0 | 0 | 100% | 0.9333 |
4DVW_NAG_A_503 | 91% | 65% | 0.087 | 0.973 | 0.51 | 0.81 | - | - | 1 | 0 | 100% | 0.9333 |
4OLX_NAG_G_502 | 90% | 76% | 0.095 | 0.976 | 0.34 | 0.59 | - | - | 0 | 0 | 100% | 0.9333 |
5LDS_NAG_B_1007 | 100% | 67% | 0.022 | 0.995 | 0.48 | 0.79 | - | - | 0 | 0 | 100% | 0.9333 |
6MUG_NAG_G_629 | 100% | 76% | 0.022 | 0.994 | 0.35 | 0.58 | - | - | 0 | 0 | 100% | 0.9333 |
3PPS_NAG_B_760 | 100% | 44% | 0.028 | 0.993 | 0.57 | 1.57 | - | 3 | 0 | 0 | 100% | 0.9333 |
5O59_NAG_A_601 | 100% | 70% | 0.024 | 0.993 | 0.3 | 0.85 | - | - | 0 | 0 | 100% | 0.9333 |
5U7O_NAG_B_704 | 100% | 88% | 0.024 | 0.989 | 0.23 | 0.44 | - | - | 0 | 0 | 100% | 0.9333 |