GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4Z87 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4Z87_GDP_D_602 | 89% | 39% | 0.088 | 0.973 | 0.96 | 1.31 | 1 | 4 | 3 | 0 | 100% | 1 |
| 4Z87_GDP_C_603 | 80% | 37% | 0.099 | 0.954 | 1.06 | 1.31 | 1 | 4 | 1 | 0 | 100% | 1 |
| 4Z87_GDP_B_602 | 74% | 42% | 0.125 | 0.959 | 0.97 | 1.17 | 1 | 2 | 0 | 0 | 100% | 1 |
| 4Z87_GDP_A_603 | 73% | 42% | 0.131 | 0.964 | 0.98 | 1.17 | 1 | 3 | 4 | 0 | 100% | 1 |
| 4Z87_GDP_B_603 | 71% | 38% | 0.134 | 0.959 | 0.94 | 1.39 | 1 | 5 | 1 | 0 | 100% | 1 |
| 4Z87_GDP_A_602 | 70% | 39% | 0.126 | 0.948 | 0.95 | 1.3 | 1 | 4 | 0 | 0 | 100% | 1 |
| 4Z87_GDP_C_602 | 68% | 39% | 0.114 | 0.927 | 1.08 | 1.2 | 1 | 3 | 0 | 0 | 100% | 1 |
| 4Z87_GDP_D_601 | 65% | 38% | 0.113 | 0.916 | 1.05 | 1.28 | 1 | 3 | 2 | 0 | 100% | 1 |
| 4Z87_GDP_A_604 | 46% | 36% | 0.147 | 0.881 | 1.05 | 1.34 | 1 | 5 | 3 | 0 | 100% | 1 |
| 4Z87_GDP_D_603 | 35% | 37% | 0.14 | 0.826 | 1.07 | 1.29 | 1 | 4 | 1 | 0 | 100% | 1 |
| 4Z87_GDP_B_604 | 30% | 38% | 0.149 | 0.815 | 0.98 | 1.34 | 1 | 4 | 1 | 0 | 100% | 1 |
| 4Z87_GDP_C_604 | 6% | 40% | 0.279 | 0.731 | 1.02 | 1.22 | 1 | 2 | 1 | 0 | 100% | 1 |
| 5TC3_GDP_A_602 | 62% | 12% | 0.15 | 0.945 | 2.33 | 1.63 | 8 | 7 | 1 | 0 | 100% | 1 |
| 6RPU_GDP_A_602 | 20% | 42% | 0.205 | 0.813 | 0.94 | 1.19 | 1 | 2 | 3 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 22% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9C3K_GDP_B_201 | 100% | 38% | 0.014 | 0.998 | 1.15 | 1.18 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8ECR_GDP_A_302 | 100% | 28% | 0.017 | 0.998 | 1.48 | 1.32 | 2 | 4 | 0 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 44% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 36% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
