XYP: beta-D-xylopyranose

XYP is a Ligand Of Interest in 5A03 designated by the RCSB


Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5A03_XYP_C_1342 84% 55% 0.076 0.9410.68 0.89 - 100100%1
5A03_XYP_E_1342 79% 53% 0.092 0.9410.66 1 - 110100%1
5A03_XYP_A_1342 75% 59% 0.096 0.9330.66 0.78 - -00100%1
5A03_XYP_A_1341 74% 53% 0.096 0.9280.5 1.15 - 100100%1
5A03_XYP_D_1341 59% 50% 0.115 0.8970.7 1.12 - 110100%1
5A03_XYP_B_1341 58% 46% 0.106 0.8820.66 1.32 - 110100%1
5A03_XYP_F_1341 44% 47% 0.133 0.8590.67 1.24 - 110100%1
5A03_XYP_E_1341 26% 42% 0.23 0.8790.92 1.21 - 100100%1
5A03_XYP_A_1344 19% 58% 0.19 0.7930.71 0.76 - -00100%1
5A03_XYP_D_1342 19% 51% 0.249 0.8520.65 1.12 - 100100%1
5A03_XYP_E_1343 16% 30% 0.205 0.7840.88 1.79 - 210100%1
5A03_XYP_C_1341 12% 44% 0.285 0.8260.61 1.42 - 100100%1
5A03_XYP_A_1343 4% 52% 0.32 0.7150.74 0.97 - 120100%1
1OD8_XYP_A_1311 99% 60% 0.047 0.9920.75 0.64 - -00100%1
1V0M_XYP_A_1304 99% 67% 0.035 0.9930.82 0.33 - -0090%1
8Y00_XYP_D_201 98% 26% 0.032 0.9860.63 2.19 - 71090%1
2WYS_XYP_A_1001 98% 36% 0.052 0.9830.69 1.7 - 430100%1
4PMY_XYP_A_401 98% 69% 0.051 0.9790.49 0.57 - -00100%1