Ligand validation:5D04

EDO: 1,2-ETHANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5D04_EDO_C_408	56%	87%	0.099	0.868	0.4	0.25	-	-	0	0	100%	1
5D04_EDO_D_408	28%	79%	0.205	0.864	0.5	0.3	-	-	0	0	100%	1
5D04_EDO_C_409	27%	82%	0.167	0.816	0.37	0.37	-	-	0	0	100%	1
5D04_EDO_D_409	16%	71%	0.268	0.852	0.47	0.5	-	-	3	0	100%	1
5DCB_EDO_A_403	62%	76%	0.136	0.931	0.29	0.56	-	-	0	0	100%	1
5D02_EDO_C_403	56%	76%	0.14	0.913	0.37	0.47	-	-	0	0	100%	1
5CZS_EDO_A_404	33%	84%	0.221	0.905	0.6	0.13	-	-	0	0	100%	1
5D03_EDO_D_406	32%	85%	0.18	0.858	0.43	0.26	-	-	0	0	100%	1
5CZ0_EDO_A_404	24%	85%	0.252	0.889	0.58	0.13	-	-	0	0	100%	1
4Q6J_EDO_A_302	100%	79%	0.013	0.999	0.37	0.42	-	-	0	0	100%	1
5MZ2_EDO_B_903	100%	84%	0.012	0.998	0.53	0.19	-	-	0	0	100%	1
5N9Z_EDO_K_202	100%	83%	0.017	0.998	0.39	0.34	-	-	0	0	100%	1
9O0J_EDO_A_303	100%	89%	0.017	0.996	0.25	0.33	-	-	0	0	100%	1
5EGE_EDO_A_505	100%	82%	0.019	0.997	0.5	0.26	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.