Ligand validation:5D4D

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Model completeness	Average occupancy
5D4D_AMP_R_101	15%	18%	0.255	0.825	2.2	1.27	8	2	0	100%	0.8
8YNQ_AMP_D_504	99%	40%	0.041	0.99	0.96	1.26	1	2	11	100%	1
3G89_AMP_B_304	99%	30%	0.038	0.986	1.05	1.63	1	4	6	100%	1
3LOQ_AMP_A_271	99%	42%	0.039	0.987	0.82	1.3	-	2	2	100%	1
7SNB_AMP_A_303	99%	52%	0.045	0.993	0.75	0.98	-	1	0	100%	0.78
3FWZ_AMP_B_601	99%	30%	0.037	0.984	1.15	1.55	2	4	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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