Ligand validation:5DCD

TMO: trimethylamine oxide

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5DCD_TMO_B_402	34%	3%	0.2	0.888	5.68	0.43	1	-	2	0	100%	1
5DCD_TMO_A_403	17%	4%	0.24	0.828	4.91	0.85	1	-	7	0	100%	1
5DCD_TMO_D_402	16%	3%	0.248	0.827	5.36	0.74	1	-	1	0	100%	1
5DCD_TMO_C_402	7%	2%	0.326	0.802	6.1	0.72	1	-	5	0	100%	1
5D09_TMO_A_403	20%	3%	0.216	0.824	6.3	0.17	1	-	0	0	100%	1
3T28_TMO_A_265	94%	56%	0.07	0.978	1.39	0.21	1	-	0	0	100%	0.5
4A0T_TMO_B_1554	93%	58%	0.075	0.976	1.23	0.29	1	-	0	0	100%	1
4XZ6_TMO_B_401	91%	1%	0.063	0.954	7.46	0.48	4	-	0	0	100%	1
6W9G_TMO_M_301	88%	2%	0.093	0.975	6.36	0.2	1	-	0	0	100%	1
3T29_TMO_A_261	86%	43%	0.068	0.942	1.76	0.39	1	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.