SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 5E79 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5E79_SQD_A_612 | 10% | 36% | 0.326 | 0.85 | 0.92 | 1.49 | 2 | 11 | 2 | 0 | 100% | 1 |
| 5E79_SQD_A_614 | 7% | 41% | 0.315 | 0.8 | 0.99 | 1.19 | 2 | 6 | 5 | 0 | 100% | 1 |
| 5E79_SQD_a_612 | 4% | 36% | 0.352 | 0.765 | 0.93 | 1.49 | 2 | 11 | 1 | 0 | 100% | 1 |
| 5E79_SQD_X_101 | 3% | 32% | 0.344 | 0.76 | 1.16 | 1.42 | 3 | 7 | 3 | 0 | 80% | 1 |
| 5E79_SQD_a_614 | 3% | 41% | 0.389 | 0.747 | 0.99 | 1.19 | 2 | 6 | 2 | 0 | 100% | 1 |
| 5E79_SQD_l_101 | 2% | 38% | 0.241 | 0.528 | 1 | 1.32 | 3 | 8 | 5 | 0 | 100% | 1 |
| 5E79_SQD_x_101 | 2% | 32% | 0.392 | 0.716 | 1.15 | 1.43 | 3 | 7 | 4 | 0 | 80% | 1 |
| 5E79_SQD_b_601 | 0% | 35% | 0.273 | 0.362 | 1.03 | 1.41 | 3 | 9 | 12 | 0 | 100% | 1 |
| 5E79_SQD_L_102 | 0% | 38% | 0.305 | 0.351 | 1 | 1.33 | 3 | 8 | 12 | 0 | 100% | 1 |
| 5E79_SQD_B_622 | 0% | 35% | 0.289 | 0.308 | 1.03 | 1.41 | 3 | 9 | 9 | 0 | 100% | 1 |
| 5V2C_SQD_A_612 | 95% | 22% | 0.062 | 0.972 | 1.04 | 2.08 | 3 | 14 | 2 | 0 | 100% | 1 |
| 5GTI_SQD_A_409 | 89% | 28% | 0.066 | 0.95 | 0.93 | 1.82 | 2 | 12 | 2 | 0 | 100% | 1 |
| 6JLO_SQD_B_636 | 88% | 41% | 0.084 | 0.966 | 1.01 | 1.17 | 2 | 4 | 1 | 0 | 100% | 1 |
| 5GTH_SQD_A_410 | 88% | 28% | 0.065 | 0.945 | 0.92 | 1.84 | 2 | 12 | 3 | 0 | 100% | 1 |
| 5WS5_SQD_A_410 | 86% | 28% | 0.081 | 0.955 | 0.87 | 1.91 | 2 | 12 | 6 | 0 | 100% | 1 |
| 5WS6_SQD_A_411 | 85% | 30% | 0.084 | 0.954 | 0.88 | 1.78 | 2 | 12 | 8 | 0 | 100% | 1 |














