NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5F9O designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5F9O_NAG_G_504Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5F9O_NAG_G_504Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5F9O_NAG_G_504Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5F9O_NAG_G_504 56% 80% 0.109 0.880.31 0.52 - -00100%1
5F9O_NAG_G_506 40% 82% 0.122 0.8330.23 0.56 - -00100%1
5F9O_NAG_G_511 40% 89% 0.106 0.8130.19 0.44 - -00100%1
5F9O_NAG_G_510 28% 79% 0.166 0.8190.29 0.56 - -00100%1
5F9O_NAG_G_503 13% 80% 0.163 0.6980.28 0.55 - -00100%1
5F9O_NAG_G_512 10% 55% 0.174 0.6780.44 1.29 - 120100%1
5F9O_NAG_G_502 6% 79% 0.263 0.6970.3 0.56 - -30100%1
5F9O_NAG_G_505 6% 46% 0.204 0.6281.02 1.08 1 120100%1
5F9O_NAG_G_508 5% 61% 0.21 0.6210.17 1.28 - 220100%1
5F9O_NAG_G_507 4% 79% 0.188 0.5760.29 0.56 - -40100%1
5F9O_NAG_G_501 2% 79% 0.157 0.413 0.29 0.56 - -10100%1
5F9O_NAG_G_509 0% 74% 0.177 0.184 0.45 0.56 - -00100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
7SX7_NAG_G_502 100% 62% 0.032 0.9850.67 0.78 - -00100%1
7SX6_NAG_G_504 100% 85% 0.035 0.9870.21 0.52 - -00100%1
4YFL_NAG_E_507 98% 70% 0.061 0.9850.48 0.66 - -00100%1
3SE8_NAG_G_734 94% 68% 0.063 0.9610.56 0.68 - -00100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1
3GXM_NAG_A_498 100% 45% 0.026 0.9920.75 1.34 - 200100%1