Ligand validation:5FV9

UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 5FV9 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5FV9_UDP_A_1570	77%	20%	0.126	0.967	1.52	1.86	4	9	3	0	100%	1
5FV9_UDP_C_1570	66%	25%	0.146	0.953	1.36	1.69	5	7	1	0	100%	1
5FV9_UDP_E_1570	62%	27%	0.146	0.939	1.27	1.66	3	6	2	0	100%	0.5
5FV9_UDP_D_1555	59%	27%	0.159	0.943	1.08	1.84	2	8	2	0	100%	1
5FV9_UDP_F_1570	46%	20%	0.167	0.902	1.55	1.85	4	9	6	0	100%	0.5
5FV9_UDP_B_1572	39%	26%	0.184	0.891	1.25	1.72	4	6	8	0	100%	0.5
6E7I_UDP_A_601	99%	27%	0.053	0.987	1.4	1.55	4	7	0	0	100%	1
5AJP_UDP_A_1570	98%	36%	0.056	0.982	1.01	1.49	1	4	0	0	100%	1
5NDF_UDP_A_602	97%	33%	0.071	0.984	1.07	1.58	1	7	0	0	100%	1
2FFU_UDP_A_601	89%	8%	0.084	0.962	2.57	2.07	6	10	0	0	100%	1
4D0T_UDP_C_1571	88%	32%	0.107	0.984	1.17	1.52	3	8	0	0	100%	1
8X3Q_UDP_C_401	100%	3%	0.015	0.998	3.32	2.69	13	13	0	0	100%	1
8X3U_UDP_B_401	100%	3%	0.012	0.999	3.31	2.68	13	13	2	0	100%	1
8VH8_UDP_C_704	100%	62%	0.032	0.995	0.55	0.9	-	1	0	0	100%	1
4GYW_UDP_C_1101	100%	37%	0.037	0.988	1.03	1.45	2	4	0	0	100%	1
2IV7_UDP_A_1372	100%	40%	0.035	0.984	0.85	1.49	-	4	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.