Ligand validation:5JDM

1PE: PENTAETHYLENE GLYCOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5JDM_1PE_A_415	38%	67%	0.133	0.834	0.56	0.56	-	-	2	0	100%	1
5JDM_1PE_A_417	6%	64%	0.191	0.707	0.58	0.64	-	-	3	0	56%	1
3V5U_1PE_A_716	94%	70%	0.063	0.97	0.59	0.42	-	-	1	0	100%	1
5HXC_1PE_A_406	68%	66%	0.088	0.935	0.43	0.71	-	-	0	0	81%	1
5JDH_1PE_A_417	57%	70%	0.114	0.889	0.53	0.49	-	-	1	0	100%	1
5HXH_1PE_B_404	54%	67%	0.129	0.893	0.55	0.58	-	-	3	0	100%	1
5JDN_1PE_A_411	53%	66%	0.121	0.882	0.53	0.6	-	-	1	0	100%	1
7C0F_1PE_A_519	100%	63%	0.024	0.995	0.44	0.83	-	-	0	0	100%	1
7PGB_1PE_A_302	100%	77%	0.031	0.994	0.55	0.3	-	-	2	0	100%	1
6V5I_1PE_B_101	100%	68%	0.029	0.989	0.63	0.46	-	-	2	0	100%	1
5CUI_1PE_B_103	100%	73%	0.036	0.994	0.65	0.29	-	-	6	0	100%	1
6AF2_1PE_D_202	100%	71%	0.029	0.986	0.57	0.43	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.