Ligand validation:5KGD

EDO: 1,2-ETHANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5KGD_EDO_A_403	77%	73%	0.116	0.96	0.61	0.34	-	-	0	0	100%	1
5KGD_EDO_A_407	26%	78%	0.27	0.921	0.58	0.25	-	-	0	0	100%	1
5KGD_EDO_A_406	22%	73%	0.251	0.876	0.56	0.37	-	-	0	0	100%	1
5KGD_EDO_A_411	21%	76%	0.232	0.848	0.56	0.31	-	-	0	0	100%	1
5KGD_EDO_A_402	20%	70%	0.248	0.859	0.44	0.58	-	-	2	0	100%	1
5KGD_EDO_A_409	19%	85%	0.291	0.903	0.63	0.07	-	-	0	0	100%	1
5KGD_EDO_A_404	17%	68%	0.344	0.939	0.42	0.66	-	-	0	0	100%	1
5KGD_EDO_A_416	16%	82%	0.286	0.871	0.54	0.22	-	-	1	0	100%	1
5KGD_EDO_A_408	15%	73%	0.27	0.843	0.52	0.41	-	-	0	0	100%	1
5KGD_EDO_A_414	14%	72%	0.354	0.921	0.56	0.39	-	-	0	0	100%	1
5KGD_EDO_A_401	12%	72%	0.303	0.853	0.42	0.53	-	-	0	0	100%	1
5KGD_EDO_A_413	12%	68%	0.29	0.838	0.44	0.64	-	-	0	0	100%	1
5KGD_EDO_A_412	8%	75%	0.31	0.795	0.53	0.35	-	-	0	0	100%	1
5KGD_EDO_A_415	6%	76%	0.272	0.723	0.58	0.29	-	-	0	0	100%	1
5KGD_EDO_A_417	5%	79%	0.201	0.624	0.59	0.22	-	-	1	0	100%	1
5KGD_EDO_A_405	4%	74%	0.406	0.814	0.73	0.2	-	-	0	0	100%	1
5KGD_EDO_A_418	2%	72%	0.503	0.811	0.43	0.51	-	-	3	0	100%	1
5KGD_EDO_A_419	2%	83%	0.373	0.64	0.62	0.12	-	-	0	0	100%	1
5KGD_EDO_A_410	0%	73%	0.56	0.588	0.57	0.37	-	-	0	0	100%	1
5KGG_EDO_A_403	96%	72%	0.058	0.972	0.49	0.47	-	-	0	0	100%	1
8R0W_EDO_A_401	85%	87%	0.084	0.953	0.43	0.2	-	-	1	0	100%	1
3CY2_EDO_A_551	84%	80%	0.093	0.96	0.47	0.31	-	-	0	0	100%	1
5KGI_EDO_A_409	78%	84%	0.105	0.953	0.43	0.27	-	-	4	0	100%	1
4DTK_EDO_A_402	77%	85%	0.074	0.913	0.55	0.14	-	-	0	0	100%	1
4Q6J_EDO_A_302	100%	79%	0.013	0.999	0.37	0.42	-	-	0	0	100%	1
5MZ2_EDO_B_903	100%	84%	0.012	0.998	0.53	0.19	-	-	0	0	100%	1
5N9Z_EDO_K_202	100%	83%	0.017	0.998	0.39	0.34	-	-	0	0	100%	1
9O0J_EDO_A_303	100%	89%	0.017	0.996	0.25	0.33	-	-	0	0	100%	1
5EGE_EDO_A_505	100%	82%	0.019	0.997	0.5	0.26	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.