Ligand validation:5KX6

GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 5KX6 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5KX6_GDP_B_601	28%	47%	0.196	0.847	0.79	1.23	-	4	0	0	100%	1
5KX6_GDP_A_601	6%	42%	0.273	0.715	0.88	1.37	1	4	0	0	100%	0.7
5KOR_GDP_D_601	75%	41%	0.115	0.947	1.25	1.03	2	2	0	0	100%	1
5KWK_GDP_B_601	60%	41%	0.118	0.902	0.85	1.45	-	6	0	0	100%	1
1TVK_GDP_B_1500	100%	23%	0.012	0.999	2.28	0.95	3	2	8	0	100%	1
1RRG_GDP_A_183	100%	17%	0.036	0.997	2.05	1.56	7	3	0	0	100%	1
2CXX_GDP_B_2401	100%	29%	0.031	0.989	1.26	1.57	1	3	0	0	100%	1
4LUC_GDP_A_204	100%	40%	0.036	0.992	1.22	1.11	2	2	0	0	100%	1
5YMX_GDP_A_301	100%	54%	0.038	0.994	0.92	0.85	1	-	2	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.