DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)
DGD is a Ligand Of Interest in 5L8R designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5L8R_DGD_J_1106 | 66% | 49% | 0.107 | 0.934 | 0.92 | 1.06 | 4 | 5 | 3 | 0 | 88% | 0.8788 |
| 5L8R_DGD_B_854 | 48% | 49% | 0.157 | 0.913 | 0.97 | 1 | 5 | 3 | 9 | 0 | 92% | 0.9242 |
| 5L8R_DGD_4_319 | 41% | 43% | 0.157 | 0.913 | 0.73 | 1.44 | 2 | 9 | 5 | 0 | 77% | 0.7727 |
| 5L8R_DGD_G_207 | 9% | 57% | 0.219 | 0.764 | 0.59 | 1.07 | 1 | 3 | 1 | 0 | 71% | 0.7121 |
| 5L8R_DGD_B_801 | 2% | 54% | 0.237 | 0.564 | 0.61 | 1.16 | - | 6 | 3 | 0 | 62% | 0.6212 |
| 4Y28_DGD_B_7101 | 50% | 42% | 0.148 | 0.91 | 0.91 | 1.33 | 1 | 11 | 4 | 0 | 92% | 0.9242 |
| 4RKU_DGD_B_7101 | 41% | 42% | 0.149 | 0.879 | 0.88 | 1.36 | 1 | 10 | 4 | 0 | 92% | 0.9242 |
| 6ZXS_DGD_2_327 | 22% | 48% | 0.199 | 0.854 | 0.92 | 1.09 | 3 | 5 | 5 | 0 | 77% | 0.7727 |
| 7DKZ_DGD_B_850 | 16% | 33% | 0.252 | 0.825 | 1.13 | 1.5 | 6 | 10 | 6 | 0 | 100% | 1 |
| 5GTI_DGD_h_103 | 96% | 52% | 0.05 | 0.967 | 0.89 | 0.96 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
| 5V2C_DGD_C_516 | 95% | 43% | 0.067 | 0.983 | 0.89 | 1.29 | 5 | 10 | 0 | 0 | 94% | 0.9394 |
| 5WS6_DGD_h_103 | 92% | 53% | 0.065 | 0.968 | 0.86 | 0.96 | 3 | 3 | 0 | 0 | 94% | 0.9394 |
| 7M78_DGD_L_207 | 91% | 40% | 0.082 | 0.97 | 0.93 | 1.4 | 2 | 14 | 0 | 0 | 100% | 1 |
| 7YQ7_DGD_C_518 | 87% | 51% | 0.084 | 0.967 | 0.83 | 1.07 | 3 | 5 | 0 | 0 | 94% | 0.9394 |
