Ligand validation:5N1D

MPD: (4S)-2-METHYL-2,4-PENTANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5N1D_MPD_A_401	30%	53%	0.152	0.816	0.53	1.26	-	2	2	0	100%	1
5N1D_MPD_A_402	3%	62%	0.209	0.56	0.53	0.9	-	-	0	0	100%	1
4UJ2_MPD_A_1352	68%	52%	0.145	0.958	1.33	0.54	1	-	0	0	100%	1
4UJ9_MPD_A_1352	35%	50%	0.137	0.825	1.14	0.81	-	-	3	0	100%	1
4C37_MPD_A_1352	22%	60%	0.162	0.775	0.97	0.58	1	-	1	0	100%	1
5N1N_MPD_A_401	12%	58%	0.176	0.699	0.69	0.92	-	1	3	0	100%	1
1L3R_MPD_E_382	11%	43%	0.275	0.797	0.7	1.5	-	2	0	0	100%	1
4QSR_MPD_A_1204	96%	63%	0.078	0.99	0.55	0.84	-	-	0	0	100%	1
3BUI_MPD_A_1048	95%	60%	0.069	0.974	0.57	0.95	-	-	0	1	100%	1
4WPG_MPD_A_301	95%	47%	0.056	0.958	0.43	1.57	-	3	1	0	100%	1
6JOW_MPD_B_901	93%	71%	0.066	0.962	0.34	0.77	-	-	3	0	100%	1
8PO9_MPD_D_910	93%	86%	0.081	0.976	0.3	0.42	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.