Ligand validation:5NH8

XYP: beta-D-xylopyranose

XYP is a Ligand Of Interest in 5NH8 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5NH8_XYP_A_504	37%	61%	0.19	0.887	0.56	0.93	-	-	0	0	100%	1
5NH8_XYP_D_504	37%	59%	0.172	0.867	0.51	1.06	-	1	0	0	100%	1
5NH8_XYP_B_505	30%	54%	0.193	0.855	0.49	1.26	-	1	0	0	100%	1
5NH8_XYP_A_506	14%	70%	0.221	0.776	0.51	0.66	-	-	1	0	100%	1
5NH8_XYP_C_504	13%	40%	0.215	0.755	0.66	1.66	-	2	0	0	100%	1
5NH8_XYP_B_501	11%	56%	0.23	0.752	0.68	0.99	-	1	0	0	100%	1
5NH8_XYP_A_505	9%	64%	0.276	0.76	0.5	0.87	-	-	0	0	100%	1
5NH8_XYP_D_505	2%	56%	0.3	0.555	0.63	1.06	-	1	0	0	100%	1
5NH7_XYP_A_504	45%	53%	0.174	0.905	0.68	1.14	-	1	0	0	100%	1
5NH9_XYP_A_504	41%	54%	0.161	0.877	0.68	1.07	-	-	0	0	100%	1
5NHE_XYP_A_504	34%	55%	0.196	0.88	0.42	1.3	-	2	0	0	100%	1
5NHD_XYP_A_504	27%	54%	0.216	0.861	0.58	1.18	-	1	0	0	100%	1
1OD8_XYP_A_1311	100%	64%	0.047	0.992	0.75	0.64	-	-	0	0	100%	1
1V0M_XYP_A_1304	100%	71%	0.035	0.993	0.82	0.33	-	-	0	0	90%	0.9
2WYS_XYP_A_1001	99%	38%	0.052	0.983	0.69	1.7	-	4	3	0	100%	1
1V0N_XYP_A_1306	98%	60%	0.048	0.989	0.76	0.78	-	-	0	0	90%	0.9
1V0L_XYP_A_1305	98%	72%	0.055	0.992	0.52	0.57	-	-	0	0	90%	0.9

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.