1YC: 2-amino-9-[(1R,3R,6R,8R,9R,11S,14R,16R,17R,18R)-16-(6-amino-9H-purin-9-yl)-3,11,17,18-tetrahydroxy-3,11-dioxido-2,4,7,10,12,15-hexaoxa-3,11-diphosphatricyclo[12.2.1.1~6,9~]octadec-8-yl]-1,9-dihydro-6H-purin-6-one
1YC is a Ligand Of Interest in 5VDO designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5VDO_1YC_A_602 | 18% | 14% | 0.261 | 0.849 | 2.46 | 1.42 | 17 | 7 | 2 | 0 | 100% | 1 |
5VDO_1YC_B_602 | 14% | 14% | 0.285 | 0.838 | 2.45 | 1.4 | 17 | 5 | 1 | 0 | 100% | 1 |
4LOI_1YC_B_401 | 84% | 24% | 0.112 | 0.974 | 1.69 | 1.45 | 7 | 7 | 0 | 0 | 100% | 0.5 |