PMP: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE
PMP is a Ligand Of Interest in 5VER designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5VER_PMP_B_501 | 64% | 7% | 0.184 | 0.985 | 3.37 | 1.55 | 3 | 5 | 0 | 0 | 100% | 1 |
| 5VEQ_PMP_B_501 | 83% | 7% | 0.123 | 0.981 | 3.54 | 1.45 | 3 | 3 | 0 | 0 | 100% | 1 |
| 3E2Y_PMP_B_456 | 82% | 51% | 0.112 | 0.967 | 0.86 | 1.02 | 1 | 2 | 4 | 0 | 100% | 1 |
| 3E2Z_PMP_B_456 | 74% | 21% | 0.154 | 0.986 | 1.5 | 1.83 | 3 | 3 | 3 | 0 | 100% | 1 |
| 2QB3_PMP_A_700 | 99% | 24% | 0.05 | 0.985 | 2.08 | 1.04 | 4 | - | 0 | 0 | 100% | 0.4 |
| 4E3Q_PMP_B_503 | 99% | 23% | 0.048 | 0.982 | 1.44 | 1.75 | 1 | 6 | 0 | 0 | 100% | 1 |
| 8TN3_PMP_B_501 | 99% | 52% | 0.058 | 0.99 | 0.87 | 0.99 | - | 1 | 0 | 0 | 100% | 1 |
| 8PNX_PMP_A_301 | 99% | 55% | 0.053 | 0.984 | 0.56 | 1.16 | - | 2 | 0 | 0 | 100% | 1 |
| 6HBV_PMP_A_502 | 99% | 16% | 0.061 | 0.992 | 2.55 | 1.19 | 3 | 2 | 0 | 0 | 100% | 0.5 |
