Ligand validation:5VTW

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5VTW designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5VTW_NAG_E_506	46%	56%	0.189	0.925	0.51	1.15	-	-	0	0	100%	0.9333
5VTW_NAG_A_404	34%	49%	0.214	0.898	0.6	1.36	-	3	0	0	100%	0.9333
5VTW_NAG_C_501	25%	24%	0.222	0.855	0.61	2.47	-	5	0	0	100%	0.9333
5VTW_NAG_E_501	22%	52%	0.206	0.822	0.5	1.35	-	1	0	0	100%	0.9333
5VTW_NAG_F_201	2%	25%	0.457	0.761	0.57	2.45	-	4	0	0	100%	0.9333
5VTW_NAG_C_502	2%	40%	0.38	0.614	0.64	1.67	-	1	0	0	100%	0.9333
3HMG_NAG_A_334	81%	39%	0.002	0.851	0.94	1.45	-	3	0	0	100%	0.9333
4HMG_NAG_E_334	81%	47%	0.074	0.924	0.7	1.34	-	1	0	0	100%	0.9333
5K9Q_NAG_F_201	76%	87%	0.08	0.916	0.2	0.49	-	-	0	0	100%	0.9333
2HMG_NAG_C_348	76%	52%	0.088	0.924	0.62	1.22	-	2	0	0	100%	0.9333
1HGD_NAG_E_334	72%	49%	0.085	0.908	0.8	1.17	-	2	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
3PPS_NAG_B_760	100%	44%	0.028	0.993	0.57	1.57	-	3	0	0	100%	0.9333
5O59_NAG_A_601	100%	70%	0.024	0.993	0.3	0.85	-	-	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.