5XB2 | pdb_00005xb2


ADP: ADENOSINE-5'-DIPHOSPHATE

ADP is a Ligand Of Interest in 5XB2 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5XB2_ADP_A_201Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5XB2_ADP_A_201Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter5XB2_ADP_A_201Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5XB2_ADP_A_201 79% 42% 0.117 0.9630.95 1.31 1 300100%1
5XB2_ADP_B_201 78% 41% 0.119 0.9630.95 1.32 1 400100%1
5H56_ADP_A_201 99% 42% 0.05 0.9890.96 1.28 - 300100%1
5XB3_ADP_B_201 99% 35% 0.057 0.9881.12 1.42 2 400100%1
3KB1_ADP_A_301 100% 22% 0.021 0.9962.06 1.21 6 410100%1
3TW6_ADP_B_2000 100% 44% 0.019 0.9970.83 1.34 - 430100%1
5GZA_ADP_A_401 100% 2% 0.019 0.9973.36 3.39 13 1110100%1
5KHW_ADP_A_1201 100% 41% 0.023 0.9951.1 1.2 1 200100%1
8VZA_ADP_A_603 100% 37% 0.024 0.9950.96 1.51 1 500100%1