6DHE | pdb_00006dhe


PL9: 2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONE

PL9 is a Ligand Of Interest in 6DHE designated by the RCSB
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Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter6DHE_PL9_D_406Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter6DHE_PL9_D_406Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter6DHE_PL9_D_406Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
6DHE_PL9_D_406 81% 25% 0.101 0.9541.51 1.54 10 1400100%1
6DHE_PL9_d_406 81% 22% 0.1 0.9521.35 1.85 6 22 00100%1
6DHE_PL9_a_410 16% 31% 0.218 0.7911.12 1.62 2 1300100%0.9
6DHE_PL9_A_409 10% 28% 0.256 0.7671.1 1.75 3 1200100%0.85
3WU2_PL9_d_405 98% 30% 0.047 0.9661.27 1.53 9 1300100%1
5WS6_PL9_D_405 97% 37% 0.055 0.9670.69 1.76 2 21 00100%1
5B5E_PL9_d_406 96% 33% 0.054 0.9651.05 1.59 4 1200100%1
5GTI_PL9_d_405 96% 36% 0.053 0.9620.64 1.86 2 22 00100%1
5V2C_PL9_d_407 96% 34% 0.069 0.9781.27 1.32 8 1000100%1
1VF5_PL9_Q_1305 98% 4% 0.062 0.9843.4 2.39 21 16320100%1