RIP: beta-D-ribopyranose
RIP is a Ligand Of Interest in 6EM7 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6EM7_RIP_D_101 | 18% | 60% | 0.161 | 0.785 | 0.88 | 0.67 | 1 | - | 0 | 0 | 80% | 0.8 |
6I2A_RIP_D_101 | 97% | 68% | 0.053 | 0.968 | 0.23 | 1 | - | - | 0 | 0 | 100% | 0.9 |
6ESA_RIP_E_101 | 13% | 56% | 0.161 | 0.739 | 1.01 | 0.69 | 1 | - | 0 | 0 | 80% | 0.8 |
5OUA_RIP_B_101 | 7% | 51% | 0.228 | 0.736 | 0.88 | 1 | 1 | 1 | 0 | 0 | 70% | 0.7 |
6EMA_RIP_C_101 | 6% | 69% | 0.19 | 0.629 | 0.21 | 0.96 | - | 1 | 1 | 0 | 100% | 1 |
5OUC_RIP_E_101 | 6% | 52% | 0.189 | 0.664 | 0.79 | 1.06 | - | 1 | 0 | 0 | 70% | 0.7 |
2IOY_RIP_B_402 | 96% | 57% | 0.068 | 0.979 | 0.69 | 0.96 | - | - | 0 | 0 | 100% | 1 |
4RY0_RIP_A_401 | 95% | 37% | 0.089 | 0.992 | 1.13 | 1.32 | 2 | 1 | 0 | 0 | 100% | 1 |
3P13_RIP_B_201 | 75% | 50% | 0.126 | 0.959 | 0.64 | 1.27 | - | 2 | 0 | 0 | 100% | 1 |
6I2H_RIP_D_101 | 73% | 70% | 0.086 | 0.912 | 0.34 | 0.82 | - | - | 0 | 0 | 100% | 0.9 |
6X8Y_RIP_A_201 | 73% | 62% | 0.132 | 0.958 | 0.67 | 0.77 | - | - | 0 | 0 | 100% | 1 |